Warning: Permanently added '3.235.68.125' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/8604392-fedora-42-x86_64 --chroot fedora-42-x86_64 Version: 1.2 PID: 13852 Logging PID: 13853 Task: {'allow_user_ssh': False, 'appstream': False, 'background': True, 'build_id': 8604392, 'buildroot_pkgs': [], 'chroot': 'fedora-42-x86_64', 'enable_net': False, 'fedora_review': False, 'git_hash': '188a08fe0328a8fa7123c1567375c81bd734baa8', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/psimovec/openblas-0.3.23/libsonata', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'libsonata', 'package_version': '0.1.29-1', 'project_dirname': 'openblas-0.3.23', 'project_name': 'openblas-0.3.23', 'project_owner': 'psimovec', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/psimovec/openblas-0.3.23/fedora-42-x86_64/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None}, {'baseurl': 'http://kojipkgs.fedoraproject.org/repos/rawhide/latest/$basearch/', 'id': 'http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch', 'name': 'Additional repo http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch'}], 'sandbox': 'psimovec/openblas-0.3.23--https://src.fedoraproject.org/user/music', 'source_json': {}, 'source_type': None, 'ssh_public_keys': None, 'storage': None, 'submitter': 'https://src.fedoraproject.org/user/music', 'tags': [], 'task_id': '8604392-fedora-42-x86_64', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/psimovec/openblas-0.3.23/libsonata /var/lib/copr-rpmbuild/workspace/workdir-7x8rdpi9/libsonata --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/psimovec/openblas-0.3.23/libsonata', '/var/lib/copr-rpmbuild/workspace/workdir-7x8rdpi9/libsonata', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-7x8rdpi9/libsonata'... Running: git checkout 188a08fe0328a8fa7123c1567375c81bd734baa8 -- cmd: ['git', 'checkout', '188a08fe0328a8fa7123c1567375c81bd734baa8', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-7x8rdpi9/libsonata rc: 0 stdout: stderr: Note: switching to '188a08fe0328a8fa7123c1567375c81bd734baa8'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 188a08f automatic import of libsonata Running: dist-git-client sources cmd: ['dist-git-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-7x8rdpi9/libsonata rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading libsonata-0.1.29.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o libsonata-0.1.29.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/psimovec/openblas-0.3.23/libsonata/libsonata-0.1.29.tar.gz/md5/19d50fd05375380699ca7d9b04f1083f/libsonata-0.1.29.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 634k 100 634k 0 0 47.2M 0 --:--:-- --:--:-- --:--:-- 47.6M INFO: Reading stdout from command: md5sum libsonata-0.1.29.tar.gz /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-7x8rdpi9/libsonata/libsonata.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-7x8rdpi9/libsonata --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1738675788.601316 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 6.0 starting (python version = 3.13.0, NVR = mock-6.0-1.fc41), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-7x8rdpi9/libsonata/libsonata.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-7x8rdpi9/libsonata --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1738675788.601316 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-7x8rdpi9/libsonata/libsonata.spec) Config(fedora-42-x86_64) Start: clean chroot Finish: clean chroot Mock Version: 6.0 INFO: Mock Version: 6.0 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-42-x86_64-bootstrap-1738675788.601316/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using container image: registry.fedoraproject.org/fedora:42 INFO: Pulling image: registry.fedoraproject.org/fedora:42 INFO: Tagging container image as mock-bootstrap-683ddccd-0c34-4e2e-9c74-1961a07a5466 INFO: Checking that 3b26c95bbe87cc88f475ce9c0ba4b394bf23541b10bebe9a634c9c8e61f73b10 image matches host's architecture INFO: Copy content of container 3b26c95bbe87cc88f475ce9c0ba4b394bf23541b10bebe9a634c9c8e61f73b10 to /var/lib/mock/fedora-42-x86_64-bootstrap-1738675788.601316/root INFO: mounting 3b26c95bbe87cc88f475ce9c0ba4b394bf23541b10bebe9a634c9c8e61f73b10 with podman image mount INFO: image 3b26c95bbe87cc88f475ce9c0ba4b394bf23541b10bebe9a634c9c8e61f73b10 as /var/lib/containers/storage/overlay/d3212d8beae72a97d426f4f4cbc9926037985c9d492b381ad2608549e5b9deb3/merged INFO: umounting image 3b26c95bbe87cc88f475ce9c0ba4b394bf23541b10bebe9a634c9c8e61f73b10 (/var/lib/containers/storage/overlay/d3212d8beae72a97d426f4f4cbc9926037985c9d492b381ad2608549e5b9deb3/merged) with podman image umount INFO: Removing image mock-bootstrap-683ddccd-0c34-4e2e-9c74-1961a07a5466 INFO: Package manager dnf5 detected and used (fallback) INFO: Not updating bootstrap chroot, bootstrap_image_ready=True Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-42-x86_64-1738675788.601316/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.20.0-1.fc42.x86_64 rpm-sequoia-1.7.0-3.fc42.x86_64 dnf5-5.2.8.1-2.fc42.x86_64 dnf5-plugins-5.2.8.1-2.fc42.x86_64 Start: installing minimal buildroot with dnf5 Updating and loading repositories: updates 100% | 105.5 KiB/s | 29.1 KiB | 00m00s fedora 100% | 102.9 KiB/s | 29.1 KiB | 00m00s Copr repository 100% | 34.9 KiB/s | 1.5 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 182.3 KiB/s | 3.8 KiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing group/module packages: bash x86_64 5.2.37-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 8.2 MiB bzip2 x86_64 1.0.8-20.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 99.3 KiB coreutils x86_64 9.6-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 5.5 MiB cpio x86_64 2.15-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 MiB diffutils x86_64 3.10-9.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.6 MiB fedora-release-common noarch 42-0.16 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 19.8 KiB findutils x86_64 1:4.10.0-5.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 MiB gawk x86_64 5.3.1-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.7 MiB glibc-minimal-langpack x86_64 2.40.9000-35.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 0.0 B grep x86_64 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http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.3 MiB dbus x86_64 1:1.16.0-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 0.0 B dbus-broker x86_64 36-5.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 395.1 KiB dbus-common noarch 1:1.16.0-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 11.2 KiB debugedit x86_64 5.1-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 200.4 KiB dwz x86_64 0.15-9.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 291.0 KiB ed x86_64 1.21-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 146.5 KiB efi-srpm-macros noarch 6-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 40.1 KiB elfutils x86_64 0.192-8.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.7 MiB elfutils-debuginfod-client x86_64 0.192-8.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 83.9 KiB 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KiB libssh x86_64 0.11.1-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 565.5 KiB libssh-config noarch 0.11.1-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 277.0 B libstdc++ x86_64 15.0.1-0.6.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.8 MiB libtasn1 x86_64 4.19.0-11.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 175.6 KiB libtirpc x86_64 1.3.6-1.rc3.fc42.2 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 199.0 KiB libtool-ltdl x86_64 2.5.4-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 70.1 KiB libunistring x86_64 1.1-9.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.7 MiB libuuid x86_64 2.40.4-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 37.3 KiB libverto x86_64 0.3.2-10.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 25.4 KiB libxcrypt x86_64 4.4.38-4.fc42 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KiB openblas-srpm-macros noarch 2-19.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 112.0 B openldap x86_64 2.6.9-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 655.1 KiB openssl-libs x86_64 1:3.2.2-14.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 7.8 MiB p11-kit x86_64 0.25.5-5.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.2 MiB p11-kit-trust x86_64 0.25.5-5.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 395.5 KiB package-notes-srpm-macros noarch 0.5-13.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.6 KiB pam x86_64 1.7.0-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.6 MiB pam-libs x86_64 1.7.0-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 126.7 KiB pcre2 x86_64 10.44-1.fc42.2 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 649.3 KiB pcre2-syntax noarch 10.44-1.fc42.2 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 251.6 KiB perl-srpm-macros noarch 1-57.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 861.0 B pkgconf x86_64 2.3.0-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 88.5 KiB pkgconf-m4 noarch 2.3.0-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 14.4 KiB pkgconf-pkg-config x86_64 2.3.0-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 989.0 B popt x86_64 1.19-8.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 132.8 KiB publicsuffix-list-dafsa noarch 20250116-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 68.5 KiB pyproject-srpm-macros noarch 1.16.4-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 KiB python-srpm-macros noarch 3.13-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 51.0 KiB qt5-srpm-macros noarch 5.15.15-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 500.0 B qt6-srpm-macros noarch 6.8.2-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 456.0 B readline x86_64 8.2-12.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 485.0 KiB rpm x86_64 4.20.0-8.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.0 MiB rpm-build-libs x86_64 4.20.0-8.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 202.6 KiB rpm-libs x86_64 4.20.0-8.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 721.8 KiB rpm-sequoia x86_64 1.7.0-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.4 MiB rust-srpm-macros noarch 26.3-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 4.8 KiB setup noarch 2.15.0-10.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 720.7 KiB sqlite-libs x86_64 3.47.2-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.5 MiB systemd x86_64 257.2-17.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 17.4 MiB systemd-libs x86_64 257.2-17.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.2 MiB systemd-pam x86_64 257.2-17.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 MiB systemd-rpm-macros noarch 257.2-17.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 10.7 KiB tree-sitter-srpm-macros noarch 0.1.0-8.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 6.5 KiB util-linux-core x86_64 2.40.4-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.4 MiB xxhash-libs x86_64 0.8.3-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 90.2 KiB xz-libs x86_64 1:5.6.3-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 218.3 KiB zig-srpm-macros noarch 1-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 KiB zip x86_64 3.0-43.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 698.5 KiB zlib-ng-compat x86_64 2.2.3-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 137.6 KiB zstd x86_64 1.5.6-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.7 MiB Installing groups: Buildsystem building group Transaction Summary: Installing: 164 packages Total size of inbound packages is 59 MiB. Need to download 0 B. After this operation, 199 MiB extra will be used (install 199 MiB, remove 0 B). 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100% | 0.0 B/s | 0.0 B | 00m00s [ 1/158] openldap-0:2.6.9-3.fc42.x86_6 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [158/158] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/159] cyrus-sasl-lib-0:2.1.28-30.fc 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [159/159] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/160] libevent-0:2.1.12-15.fc42.x86 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [160/160] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/161] libtool-ltdl-0:2.5.4-4.fc42.x 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [161/161] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/162] libssh-config-0:0.11.1-4.fc42 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [162/162] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/163] libunistring-0:1.1-9.fc42.x86 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [163/163] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/164] publicsuffix-list-dafsa-0:202 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [164/164] Total 100% | 0.0 B/s | 0.0 B | 00m00s Running transaction [ 1/166] Verify package files 100% | 832.0 B/s | 164.0 B | 00m00s >>> Running pre-transaction scriptlet: filesystem-0:3.18-36.fc42.x86_64 >>> Finished pre-transaction scriptlet: filesystem-0:3.18-36.fc42.x86_64 >>> [RPM] /var/lib/mock/fedora-42-x86_64-1738675788.601316/root/var/cache/dnf/co [ 2/166] Prepare transaction 100% | 3.6 KiB/s | 164.0 B | 00m00s [ 3/166] Installing libgcc-0:15.0.1-0. 100% | 262.0 MiB/s | 268.3 KiB | 00m00s [ 4/166] Installing publicsuffix-list- 100% | 0.0 B/s | 69.2 KiB | 00m00s [ 5/166] Installing libssh-config-0:0. 100% | 0.0 B/s | 816.0 B | 00m00s [ 6/166] Installing fedora-release-ide 100% | 0.0 B/s | 976.0 B | 00m00s [ 7/166] Installing fedora-gpg-keys-0: 100% | 42.7 MiB/s | 174.8 KiB | 00m00s [ 8/166] Installing fedora-repos-rawhi 100% | 0.0 B/s | 2.4 KiB | 00m00s [ 9/166] Installing fedora-repos-0:42- 100% | 0.0 B/s | 5.7 KiB | 00m00s [ 10/166] Installing fedora-release-com 100% | 23.6 MiB/s | 24.1 KiB | 00m00s [ 11/166] Installing fedora-release-0:4 100% | 0.0 B/s | 124.0 B | 00m00s [ 12/166] Installing setup-0:2.15.0-10. 100% | 59.1 MiB/s | 726.5 KiB | 00m00s >>> [RPM] /etc/hosts created as /etc/hosts.rpmnew [ 13/166] Installing filesystem-0:3.18- 100% | 2.8 MiB/s | 212.4 KiB | 00m00s [ 14/166] Installing basesystem-0:11-22 100% | 0.0 B/s | 124.0 B | 00m00s [ 15/166] Installing pcre2-syntax-0:10. 100% | 248.1 MiB/s | 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KiB | 00m00s [ 67/166] Installing lua-libs-0:5.4.7-2 100% | 275.5 MiB/s | 282.1 KiB | 00m00s [ 68/166] Installing libtasn1-0:4.19.0- 100% | 173.2 MiB/s | 177.4 KiB | 00m00s [ 69/166] Installing p11-kit-0:0.25.5-5 100% | 121.3 MiB/s | 2.2 MiB | 00m00s [ 70/166] Installing libunistring-0:1.1 100% | 345.3 MiB/s | 1.7 MiB | 00m00s [ 71/166] Installing libidn2-0:2.3.7-3. 100% | 163.6 MiB/s | 335.0 KiB | 00m00s [ 72/166] Installing libpsl-0:0.21.5-5. 100% | 0.0 B/s | 77.5 KiB | 00m00s [ 73/166] Installing p11-kit-trust-0:0. 100% | 19.4 MiB/s | 397.2 KiB | 00m00s [ 74/166] Installing openssl-libs-1:3.2 100% | 391.8 MiB/s | 7.8 MiB | 00m00s [ 75/166] Installing coreutils-0:9.6-1. 100% | 168.1 MiB/s | 5.5 MiB | 00m00s [ 76/166] Installing ca-certificates-0: 100% | 2.1 MiB/s | 2.4 MiB | 00m01s [ 77/166] Installing gzip-0:1.13-3.fc42 100% | 27.8 MiB/s | 398.4 KiB | 00m00s [ 78/166] Installing authselect-libs-0: 100% | 163.1 MiB/s | 835.0 KiB | 00m00s [ 79/166] Installing cracklib-0:2.9.11- 100% | 17.7 MiB/s | 253.7 KiB | 00m00s [ 80/166] Installing libpwquality-0:1.4 100% | 29.4 MiB/s | 421.6 KiB | 00m00s [ 81/166] Installing rpm-sequoia-0:1.7. 100% | 344.9 MiB/s | 2.4 MiB | 00m00s [ 82/166] Installing libevent-0:2.1.12- 100% | 295.2 MiB/s | 906.9 KiB | 00m00s [ 83/166] Installing zstd-0:1.5.6-3.fc4 100% | 113.0 MiB/s | 1.7 MiB | 00m00s [ 84/166] Installing tar-2:1.35-5.fc42. 100% | 148.1 MiB/s | 3.0 MiB | 00m00s [ 85/166] Installing libsemanage-0:3.8- 100% | 151.5 MiB/s | 310.2 KiB | 00m00s [ 86/166] Installing shadow-utils-2:4.1 100% | 143.5 MiB/s | 4.0 MiB | 00m00s [ 87/166] Installing zip-0:3.0-43.fc42. 100% | 52.8 MiB/s | 702.4 KiB | 00m00s [ 88/166] Installing gdbm-1:1.23-9.fc42 100% | 34.9 MiB/s | 465.2 KiB | 00m00s [ 89/166] Installing cyrus-sasl-lib-0:2 100% | 135.5 MiB/s | 2.3 MiB | 00m00s [ 90/166] Installing bzip2-0:1.0.8-20.f 100% | 8.5 MiB/s | 103.8 KiB | 00m00s [ 91/166] Installing libxml2-0:2.12.9-2 100% | 106.7 MiB/s | 1.7 MiB | 00m00s [ 92/166] Installing libarchive-0:3.7.7 100% | 306.2 MiB/s | 940.6 KiB | 00m00s [ 93/166] Installing add-determinism-0: 100% | 144.5 MiB/s | 2.5 MiB | 00m00s [ 94/166] Installing build-reproducibil 100% | 0.0 B/s | 1.0 KiB | 00m00s [ 95/166] Installing sqlite-libs-0:3.47 100% | 376.1 MiB/s | 1.5 MiB | 00m00s [ 96/166] Installing filesystem-srpm-ma 100% | 0.0 B/s | 38.9 KiB | 00m00s [ 97/166] Installing ed-0:1.21-2.fc42.x 100% | 12.1 MiB/s | 148.8 KiB | 00m00s [ 98/166] Installing patch-0:2.7.6-26.f 100% | 21.2 MiB/s | 260.2 KiB | 00m00s [ 99/166] Installing elfutils-default-y 100% | 340.5 KiB/s | 2.0 KiB | 00m00s [100/166] Installing elfutils-libs-0:0. 100% | 220.3 MiB/s | 676.7 KiB | 00m00s [101/166] Installing dbus-common-1:1.16 100% | 2.2 MiB/s | 13.6 KiB | 00m00s [102/166] Installing cpio-0:2.15-2.fc41 100% | 68.7 MiB/s | 1.1 MiB | 00m00s [103/166] Installing diffutils-0:3.10-9 100% | 99.4 MiB/s | 1.6 MiB | 00m00s [104/166] Installing libpkgconf-0:2.3.0 100% | 0.0 B/s | 79.2 KiB | 00m00s [105/166] Installing pkgconf-0:2.3.0-2. 100% | 7.4 MiB/s | 91.0 KiB | 00m00s [106/166] Installing keyutils-libs-0:1. 100% | 58.3 MiB/s | 59.7 KiB | 00m00s [107/166] Installing libverto-0:0.3.2-1 100% | 26.6 MiB/s | 27.2 KiB | 00m00s [108/166] Installing krb5-libs-0:1.21.3 100% | 328.5 MiB/s | 2.3 MiB | 00m00s [109/166] Installing libtirpc-0:1.3.6-1 100% | 196.0 MiB/s | 200.7 KiB | 00m00s [110/166] Installing libnsl2-0:2.0.1-3. 100% | 57.6 MiB/s | 59.0 KiB | 00m00s [111/166] Installing pam-0:1.7.0-4.fc42 100% | 77.0 MiB/s | 1.7 MiB | 00m00s [112/166] Installing util-linux-0:2.40. 100% | 104.9 MiB/s | 3.5 MiB | 00m00s [113/166] Installing libssh-0:0.11.1-4. 100% | 277.1 MiB/s | 567.5 KiB | 00m00s [114/166] Installing jansson-0:2.14-2.f 100% | 92.2 MiB/s | 94.4 KiB | 00m00s [115/166] Installing libgomp-0:15.0.1-0 100% | 262.2 MiB/s | 537.0 KiB | 00m00s [116/166] Installing json-c-0:0.18-2.fc 100% | 85.9 MiB/s | 88.0 KiB | 00m00s [117/166] Installing libseccomp-0:2.5.5 100% | 171.1 MiB/s | 175.2 KiB | 00m00s [118/166] Installing expat-0:2.6.4-2.fc 100% | 12.0 MiB/s | 294.9 KiB | 00m00s [119/166] Installing dbus-broker-0:36-5 100% | 19.4 MiB/s | 397.6 KiB | 00m00s [120/166] Installing dbus-1:1.16.0-3.fc 100% | 0.0 B/s | 124.0 B | 00m00s [121/166] Installing systemd-pam-0:257. 100% | 222.5 MiB/s | 1.1 MiB | 00m00s [122/166] Installing systemd-0:257.2-17 100% | 117.7 MiB/s | 17.5 MiB | 00m00s >>> Running post-install scriptlet: systemd-0:257.2-17.fc42.x86_64 >>> Finished post-install scriptlet: systemd-0:257.2-17.fc42.x86_64 >>> Scriptlet output: >>> Creating group 'systemd-journal' with GID 190. >>> Creating group 'systemd-oom' with GID 999. >>> Creating user 'systemd-oom' (systemd Userspace OOM Killer) with UID 999 and >>> [123/166] Installing rpm-libs-0:4.20.0- 100% | 235.4 MiB/s | 723.3 KiB | 00m00s [124/166] Installing rpm-build-libs-0:4 100% | 198.7 MiB/s | 203.4 KiB | 00m00s [125/166] Installing xxhash-libs-0:0.8. 100% | 89.4 MiB/s | 91.6 KiB | 00m00s [126/166] Installing libbrotli-0:1.1.0- 100% | 274.6 MiB/s | 843.6 KiB | 00m00s [127/166] Installing libnghttp2-0:1.64. 100% | 167.5 MiB/s | 171.5 KiB | 00m00s [128/166] Installing libtool-ltdl-0:2.5 100% | 0.0 B/s | 71.2 KiB | 00m00s [129/166] Installing openldap-0:2.6.9-3 100% | 214.5 MiB/s | 658.9 KiB | 00m00s [130/166] Installing libcurl-0:8.11.1-4 100% | 274.5 MiB/s | 843.2 KiB | 00m00s [131/166] Installing elfutils-debuginfo 100% | 6.5 MiB/s | 86.2 KiB | 00m00s [132/166] Installing binutils-0:2.43.50 100% | 327.3 MiB/s | 25.9 MiB | 00m00s [133/166] Installing elfutils-0:0.192-8 100% | 141.4 MiB/s | 2.7 MiB | 00m00s [134/166] Installing gdb-minimal-0:15.2 100% | 289.8 MiB/s | 13.0 MiB | 00m00s [135/166] Installing debugedit-0:5.1-4. 100% | 16.5 MiB/s | 203.1 KiB | 00m00s [136/166] Installing curl-0:8.11.1-4.fc 100% | 21.1 MiB/s | 453.1 KiB | 00m00s [137/166] Installing rpm-0:4.20.0-8.fc4 100% | 99.5 MiB/s | 2.5 MiB | 00m00s [138/166] Installing efi-srpm-macros-0: 100% | 0.0 B/s | 41.1 KiB | 00m00s 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gnat-srpm-macros-0 100% | 0.0 B/s | 1.3 KiB | 00m00s [153/166] Installing ghc-srpm-macros-0: 100% | 0.0 B/s | 1.0 KiB | 00m00s [154/166] Installing fpc-srpm-macros-0: 100% | 0.0 B/s | 420.0 B | 00m00s [155/166] Installing ansible-srpm-macro 100% | 0.0 B/s | 36.2 KiB | 00m00s [156/166] Installing fonts-srpm-macros- 100% | 0.0 B/s | 57.0 KiB | 00m00s [157/166] Installing forge-srpm-macros- 100% | 0.0 B/s | 40.3 KiB | 00m00s [158/166] Installing go-srpm-macros-0:3 100% | 0.0 B/s | 62.0 KiB | 00m00s [159/166] Installing python-srpm-macros 100% | 0.0 B/s | 52.2 KiB | 00m00s [160/166] Installing redhat-rpm-config- 100% | 94.5 MiB/s | 193.5 KiB | 00m00s [161/166] Installing rpm-build-0:4.20.0 100% | 13.0 MiB/s | 173.7 KiB | 00m00s [162/166] Installing pyproject-srpm-mac 100% | 0.0 B/s | 2.5 KiB | 00m00s [163/166] Installing authselect-0:1.5.0 100% | 13.1 MiB/s | 160.4 KiB | 00m00s [164/166] Installing which-0:2.23-1.fc4 100% | 7.6 MiB/s | 85.6 KiB | 00m00s [165/166] Installing info-0:7.2-3.fc42. 100% | 29.2 MiB/s | 358.3 KiB | 00m00s [166/166] Installing systemd-rpm-macros 100% | 7.1 KiB/s | 11.3 KiB | 00m02s Warning: skipped OpenPGP checks for 164 packages from repositories: copr_base, http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch Complete! Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: add-determinism-0.5.0-2.fc42.x86_64 alternatives-1.31-3.fc42.x86_64 ansible-srpm-macros-1-17.1.fc42.noarch audit-libs-4.0.3-2.fc42.x86_64 authselect-1.5.0-9.fc42.x86_64 authselect-libs-1.5.0-9.fc42.x86_64 basesystem-11-22.fc42.noarch bash-5.2.37-1.fc42.x86_64 binutils-2.43.50-12.fc42.x86_64 build-reproducibility-srpm-macros-0.5.0-2.fc42.noarch bzip2-1.0.8-20.fc42.x86_64 bzip2-libs-1.0.8-20.fc42.x86_64 ca-certificates-2024.2.69_v8.0.401-5.fc42.noarch coreutils-9.6-1.fc42.x86_64 coreutils-common-9.6-1.fc42.x86_64 cpio-2.15-2.fc41.x86_64 cracklib-2.9.11-7.fc42.x86_64 crypto-policies-20250124-1.git4d262e7.fc42.noarch curl-8.11.1-4.fc42.x86_64 cyrus-sasl-lib-2.1.28-30.fc42.x86_64 dbus-1.16.0-3.fc42.x86_64 dbus-broker-36-5.fc42.x86_64 dbus-common-1.16.0-3.fc42.noarch debugedit-5.1-4.fc42.x86_64 diffutils-3.10-9.fc42.x86_64 dwz-0.15-9.fc42.x86_64 ed-1.21-2.fc42.x86_64 efi-srpm-macros-6-2.fc42.noarch elfutils-0.192-8.fc42.x86_64 elfutils-debuginfod-client-0.192-8.fc42.x86_64 elfutils-default-yama-scope-0.192-8.fc42.noarch elfutils-libelf-0.192-8.fc42.x86_64 elfutils-libs-0.192-8.fc42.x86_64 expat-2.6.4-2.fc42.x86_64 fedora-gpg-keys-42-0.4.noarch fedora-release-42-0.16.noarch fedora-release-common-42-0.16.noarch fedora-release-identity-basic-42-0.16.noarch fedora-repos-42-0.4.noarch fedora-repos-rawhide-42-0.4.noarch file-5.46-1.fc42.x86_64 file-libs-5.46-1.fc42.x86_64 filesystem-3.18-36.fc42.x86_64 filesystem-srpm-macros-3.18-36.fc42.noarch findutils-4.10.0-5.fc42.x86_64 fonts-srpm-macros-2.0.5-21.fc42.noarch forge-srpm-macros-0.4.0-2.fc42.noarch fpc-srpm-macros-1.3-14.fc42.noarch gawk-5.3.1-1.fc42.x86_64 gdb-minimal-15.2-7.fc42.x86_64 gdbm-1.23-9.fc42.x86_64 gdbm-libs-1.23-9.fc42.x86_64 ghc-srpm-macros-1.9.2-2.fc42.noarch glibc-2.40.9000-35.fc42.x86_64 glibc-common-2.40.9000-35.fc42.x86_64 glibc-gconv-extra-2.40.9000-35.fc42.x86_64 glibc-minimal-langpack-2.40.9000-35.fc42.x86_64 gmp-6.3.0-2.fc41.x86_64 gnat-srpm-macros-6-7.fc42.noarch go-srpm-macros-3.6.0-6.fc42.noarch grep-3.11-10.fc42.x86_64 gzip-1.13-3.fc42.x86_64 info-7.2-3.fc42.x86_64 jansson-2.14-2.fc42.x86_64 json-c-0.18-2.fc42.x86_64 kernel-srpm-macros-1.0-25.fc42.noarch keyutils-libs-1.6.3-5.fc42.x86_64 krb5-libs-1.21.3-5.fc42.x86_64 libacl-2.3.2-3.fc42.x86_64 libarchive-3.7.7-2.fc42.x86_64 libattr-2.5.2-5.fc42.x86_64 libblkid-2.40.4-2.fc42.x86_64 libbrotli-1.1.0-6.fc42.x86_64 libcap-2.73-2.fc42.x86_64 libcap-ng-0.8.5-4.fc42.x86_64 libcom_err-1.47.2-3.fc42.x86_64 libcurl-8.11.1-4.fc42.x86_64 libeconf-0.7.5-2.fc42.x86_64 libevent-2.1.12-15.fc42.x86_64 libfdisk-2.40.4-2.fc42.x86_64 libffi-3.4.6-5.fc42.x86_64 libgcc-15.0.1-0.6.fc42.x86_64 libgomp-15.0.1-0.6.fc42.x86_64 libidn2-2.3.7-3.fc42.x86_64 libmount-2.40.4-2.fc42.x86_64 libnghttp2-1.64.0-3.fc42.x86_64 libnsl2-2.0.1-3.fc42.x86_64 libpkgconf-2.3.0-2.fc42.x86_64 libpsl-0.21.5-5.fc42.x86_64 libpwquality-1.4.5-12.fc42.x86_64 libseccomp-2.5.5-2.fc41.x86_64 libselinux-3.8-1.fc42.x86_64 libsemanage-3.8-1.fc42.x86_64 libsepol-3.8-1.fc42.x86_64 libsmartcols-2.40.4-2.fc42.x86_64 libssh-0.11.1-4.fc42.x86_64 libssh-config-0.11.1-4.fc42.noarch libstdc++-15.0.1-0.6.fc42.x86_64 libtasn1-4.19.0-11.fc42.x86_64 libtirpc-1.3.6-1.rc3.fc42.2.x86_64 libtool-ltdl-2.5.4-4.fc42.x86_64 libunistring-1.1-9.fc42.x86_64 libuuid-2.40.4-2.fc42.x86_64 libverto-0.3.2-10.fc42.x86_64 libxcrypt-4.4.38-4.fc42.x86_64 libxml2-2.12.9-2.fc42.x86_64 libzstd-1.5.6-3.fc42.x86_64 lua-libs-5.4.7-2.fc42.x86_64 lua-srpm-macros-1-15.fc42.noarch lz4-libs-1.10.0-2.fc42.x86_64 mpfr-4.2.1-6.fc42.x86_64 ncurses-base-6.5-5.20250125.fc42.noarch ncurses-libs-6.5-5.20250125.fc42.x86_64 ocaml-srpm-macros-10-4.fc42.noarch openblas-srpm-macros-2-19.fc42.noarch openldap-2.6.9-3.fc42.x86_64 openssl-libs-3.2.2-14.fc42.x86_64 p11-kit-0.25.5-5.fc42.x86_64 p11-kit-trust-0.25.5-5.fc42.x86_64 package-notes-srpm-macros-0.5-13.fc42.noarch pam-1.7.0-4.fc42.x86_64 pam-libs-1.7.0-4.fc42.x86_64 patch-2.7.6-26.fc42.x86_64 pcre2-10.44-1.fc42.2.x86_64 pcre2-syntax-10.44-1.fc42.2.noarch perl-srpm-macros-1-57.fc42.noarch pkgconf-2.3.0-2.fc42.x86_64 pkgconf-m4-2.3.0-2.fc42.noarch pkgconf-pkg-config-2.3.0-2.fc42.x86_64 popt-1.19-8.fc42.x86_64 publicsuffix-list-dafsa-20250116-1.fc42.noarch pyproject-srpm-macros-1.16.4-2.fc42.noarch python-srpm-macros-3.13-4.fc42.noarch qt5-srpm-macros-5.15.15-1.fc42.noarch qt6-srpm-macros-6.8.2-1.fc42.noarch readline-8.2-12.fc42.x86_64 redhat-rpm-config-342-2.fc42.noarch rpm-4.20.0-8.fc42.x86_64 rpm-build-4.20.0-8.fc42.x86_64 rpm-build-libs-4.20.0-8.fc42.x86_64 rpm-libs-4.20.0-8.fc42.x86_64 rpm-sequoia-1.7.0-4.fc42.x86_64 rust-srpm-macros-26.3-4.fc42.noarch sed-4.9-4.fc42.x86_64 setup-2.15.0-10.fc42.noarch shadow-utils-4.17.0-4.fc42.x86_64 sqlite-libs-3.47.2-2.fc42.x86_64 systemd-257.2-17.fc42.x86_64 systemd-libs-257.2-17.fc42.x86_64 systemd-pam-257.2-17.fc42.x86_64 systemd-rpm-macros-257.2-17.fc42.noarch tar-1.35-5.fc42.x86_64 tree-sitter-srpm-macros-0.1.0-8.fc42.noarch unzip-6.0-66.fc42.x86_64 util-linux-2.40.4-2.fc42.x86_64 util-linux-core-2.40.4-2.fc42.x86_64 which-2.23-1.fc42.x86_64 xxhash-libs-0.8.3-2.fc42.x86_64 xz-5.6.3-3.fc42.x86_64 xz-libs-5.6.3-3.fc42.x86_64 zig-srpm-macros-1-4.fc42.noarch zip-3.0-43.fc42.x86_64 zlib-ng-compat-2.2.3-2.fc42.x86_64 zstd-1.5.6-3.fc42.x86_64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1738627200 Wrote: /builddir/build/SRPMS/libsonata-0.1.29-1.fc42.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-42-x86_64-1738675788.601316/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-7x8rdpi9/libsonata/libsonata.spec) Config(child) 0 minutes 11 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/libsonata-0.1.29-1.fc42.src.rpm) Config(fedora-42-x86_64) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-42-x86_64-bootstrap-1738675788.601316/root. INFO: reusing tmpfs at /var/lib/mock/fedora-42-x86_64-bootstrap-1738675788.601316/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-42-x86_64-1738675788.601316/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.20.0-1.fc42.x86_64 rpm-sequoia-1.7.0-3.fc42.x86_64 dnf5-5.2.8.1-2.fc42.x86_64 dnf5-plugins-5.2.8.1-2.fc42.x86_64 Finish: chroot init Start: build phase for libsonata-0.1.29-1.fc42.src.rpm Start: build setup for libsonata-0.1.29-1.fc42.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1738627200 Wrote: /builddir/build/SRPMS/libsonata-0.1.29-1.fc42.src.rpm Updating and loading repositories: fedora 100% | 87.9 KiB/s | 29.1 KiB | 00m00s updates 100% | 82.5 KiB/s | 29.1 KiB | 00m00s Copr repository 100% | 90.4 KiB/s | 1.5 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 182.3 KiB/s | 3.8 KiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing: catch-devel x86_64 3.8.0-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 972.7 KiB cmake x86_64 3.31.5-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 34.2 MiB fmt-devel x86_64 11.1.2-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 567.7 KiB gcc-c++ x86_64 15.0.1-0.6.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 41.3 MiB git-core x86_64 2.48.1-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 22.7 MiB hdf5-devel x86_64 1.14.5-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.3 MiB highfive-devel x86_64 2.10.0-4.fc42 copr_base 377.1 KiB json-devel x86_64 3.11.3-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 MiB ninja-build x86_64 1.12.1-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 456.2 KiB optional-lite-devel x86_64 3.6.0-5.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 101.5 KiB pybind11-devel x86_64 2.13.6-2.fc42 copr_base 847.8 KiB python3-devel x86_64 3.13.1-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.8 MiB python3-h5py x86_64 3.12.1-5.fc42 copr_base 4.5 MiB python3-pytest noarch 8.3.4-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 20.8 MiB tomcli noarch 0.8.0-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 125.0 KiB variant-lite-devel x86_64 2.0.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 141.7 KiB Installing dependencies: CharLS x86_64 2.4.2-8.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 334.0 KiB MUMPS x86_64 5.7.3-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 9.7 MiB MUMPS-common noarch 5.7.3-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 988.4 KiB OpenCL-ICD-Loader x86_64 3.0.6-2.20241023git5907ac1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 70.7 KiB abattis-cantarell-vf-fonts noarch 0.301-14.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 192.7 KiB abseil-cpp x86_64 20240722.1-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.3 MiB alsa-lib x86_64 1.2.13-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.4 MiB annobin-docs noarch 12.88-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 98.6 KiB annobin-plugin-gcc x86_64 12.88-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 991.7 KiB aribb24 x86_64 1.0.3^20160216git5e9be27-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 81.8 KiB armadillo x86_64 12.8.1-6.fc42 copr_base 86.0 KiB arpack x86_64 3.9.1-6.fc42 copr_base 649.7 KiB asl x86_64 20241122-2.20241212gitae937db.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.2 MiB avahi-libs x86_64 0.9~rc2-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 183.6 KiB blosc x86_64 1.21.6-6.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 126.2 KiB boost x86_64 1.83.0-12.fc42 copr_base 1.3 KiB boost-atomic x86_64 1.83.0-12.fc42 copr_base 20.9 KiB boost-chrono x86_64 1.83.0-12.fc42 copr_base 37.5 KiB boost-container x86_64 1.83.0-12.fc42 copr_base 65.4 KiB boost-context x86_64 1.83.0-12.fc42 copr_base 12.4 KiB boost-contract x86_64 1.83.0-12.fc42 copr_base 99.1 KiB boost-coroutine x86_64 1.83.0-12.fc42 copr_base 21.1 KiB boost-date-time x86_64 1.83.0-12.fc42 copr_base 12.2 KiB boost-devel x86_64 1.83.0-12.fc42 copr_base 143.0 MiB boost-fiber x86_64 1.83.0-12.fc42 copr_base 78.7 KiB boost-filesystem x86_64 1.83.0-12.fc42 copr_base 143.6 KiB boost-graph x86_64 1.83.0-12.fc42 copr_base 350.7 KiB boost-iostreams x86_64 1.83.0-12.fc42 copr_base 90.6 KiB boost-json x86_64 1.83.0-12.fc42 copr_base 333.1 KiB boost-locale x86_64 1.83.0-12.fc42 copr_base 613.8 KiB boost-log x86_64 1.83.0-12.fc42 copr_base 1.5 MiB boost-math x86_64 1.83.0-12.fc42 copr_base 642.6 KiB boost-nowide x86_64 1.83.0-12.fc42 copr_base 20.8 KiB boost-numpy3 x86_64 1.83.0-12.fc42 copr_base 57.6 KiB boost-program-options x86_64 1.83.0-12.fc42 copr_base 276.7 KiB boost-python3 x86_64 1.83.0-12.fc42 copr_base 254.4 KiB boost-random x86_64 1.83.0-12.fc42 copr_base 29.6 KiB boost-regex x86_64 1.83.0-12.fc42 copr_base 287.3 KiB boost-serialization x86_64 1.83.0-12.fc42 copr_base 441.6 KiB boost-stacktrace x86_64 1.83.0-12.fc42 copr_base 55.8 KiB boost-system x86_64 1.83.0-12.fc42 copr_base 12.2 KiB boost-test x86_64 1.83.0-12.fc42 copr_base 634.8 KiB boost-thread x86_64 1.83.0-12.fc42 copr_base 132.7 KiB boost-timer x86_64 1.83.0-12.fc42 copr_base 21.0 KiB boost-type_erasure x86_64 1.83.0-12.fc42 copr_base 54.1 KiB boost-wave x86_64 1.83.0-12.fc42 copr_base 856.2 KiB cairo x86_64 1.18.2-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.8 MiB cairo-gobject 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2022.0.0-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 450.1 KiB tesseract-libs x86_64 5.5.0-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.3 MiB thrift x86_64 0.20.0-3.fc41 copr_base 4.8 MiB tomcli+tomlkit noarch 0.8.0-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 7.8 KiB tpm2-tss x86_64 4.1.3-6.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.6 MiB twolame-libs x86_64 0.4.0-6.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 165.5 KiB tzdata noarch 2024b-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.6 MiB unixODBC x86_64 2.3.12-6.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 MiB uriparser x86_64 0.9.8-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 137.7 KiB utf8proc x86_64 2.9.0-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 366.6 KiB vapoursynth-libs x86_64 70-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.0 MiB vim-filesystem noarch 2:9.1.1000-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 40.0 B vo-amrwbenc x86_64 0.1.3-22.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 153.9 KiB vtk x86_64 9.2.6-25.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 102.0 MiB xcb-util x86_64 0.4.1-7.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 26.3 KiB xcb-util-image x86_64 0.4.1-7.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 22.2 KiB xcb-util-keysyms x86_64 0.4.1-7.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 16.7 KiB xcb-util-renderutil x86_64 0.3.10-7.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 24.4 KiB xcb-util-wm x86_64 0.4.2-7.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 81.2 KiB xerces-c x86_64 3.3.0-7.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.8 MiB xkeyboard-config noarch 2.43-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 6.6 MiB xml-common noarch 0.6.3-66.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 78.4 KiB xsimd-devel noarch 13.1.0-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.4 MiB xtensor-devel x86_64 0.25.0-3.fc42 copr_base 1.9 MiB xtl-devel x86_64 0.7.7-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 768.3 KiB xvidcore x86_64 1.3.7-13.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 878.4 KiB zeromq x86_64 4.3.5-21.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 890.1 KiB zimg x86_64 3.0.5-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 821.4 KiB zlib-ng x86_64 2.2.3-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 157.0 KiB zlib-ng-compat-devel x86_64 2.2.3-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 107.0 KiB zvbi x86_64 0.2.43-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.2 MiB Transaction Summary: Installing: 436 packages Total size of inbound packages is 447 MiB. Need to download 0 B. After this operation, 2 GiB extra will be used (install 2 GiB, remove 0 B). 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Finish: build setup for libsonata-0.1.29-1.fc42.src.rpm Start: rpmbuild libsonata-0.1.29-1.fc42.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1738627200 Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.1GEQPb + umask 022 + cd /builddir/build/BUILD/libsonata-0.1.29-build + test -d /builddir/build/BUILD/libsonata-0.1.29-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/libsonata-0.1.29-build + /usr/bin/rm -rf /builddir/build/BUILD/libsonata-0.1.29-build + /usr/bin/mkdir -p /builddir/build/BUILD/libsonata-0.1.29-build + /usr/bin/mkdir -p /builddir/build/BUILD/libsonata-0.1.29-build/SPECPARTS + RPM_EC=0 ++ jobs -p + exit 0 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.HDRUvf + umask 022 + cd /builddir/build/BUILD/libsonata-0.1.29-build + cd /builddir/build/BUILD/libsonata-0.1.29-build + rm -rf libsonata-0.1.29 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/libsonata-0.1.29.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd libsonata-0.1.29 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/bin/git init -q + /usr/bin/git config user.name rpm-build + /usr/bin/git config user.email '' + /usr/bin/git config gc.auto 0 + /usr/bin/git add --force . + GIT_COMMITTER_DATE=@1738627200 + GIT_AUTHOR_DATE=@1738627200 + /usr/bin/git commit -q --allow-empty -a --author 'rpm-build ' -m 'libsonata-0.1.29 base' + /usr/bin/git checkout --track -b rpm-build Switched to a new branch 'rpm-build' branch 'rpm-build' set up to track 'master'. + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/0001-Remove-pybind-redeclarations.patch + /usr/bin/git apply --index --reject - Checking patch python/bindings.cpp... Applied patch python/bindings.cpp cleanly. + GIT_COMMITTER_DATE=@1738627200 + GIT_AUTHOR_DATE=@1738627200 + /usr/bin/git commit -q -m 0001-Remove-pybind-redeclarations.patch --author 'rpm-build ' + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/0002-Use-std-filesystem.patch + /usr/bin/git apply --index --reject - Checking patch CMakeLists.txt... Checking patch extlib/filesystem.hpp... Checking patch src/config.cpp... Checking patch src/node_sets.cpp... Checking patch src/utils.cpp... Applied patch CMakeLists.txt cleanly. Applied patch extlib/filesystem.hpp cleanly. Applied patch src/config.cpp cleanly. Applied patch src/node_sets.cpp cleanly. Applied patch src/utils.cpp cleanly. + GIT_COMMITTER_DATE=@1738627200 + GIT_AUTHOR_DATE=@1738627200 + /usr/bin/git commit -q -m 0002-Use-std-filesystem.patch --author 'rpm-build ' + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/0003-Substitute-ghc-in-tests.patch + /usr/bin/git apply --index --reject - Checking patch tests/test_config.cpp... Applied patch tests/test_config.cpp cleanly. + GIT_COMMITTER_DATE=@1738627200 + GIT_AUTHOR_DATE=@1738627200 + /usr/bin/git commit -q -m 0003-Substitute-ghc-in-tests.patch --author 'rpm-build ' + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/0004-Include-catch-catch_all.hpp-instead-of-catch-catch.h.patch + /usr/bin/git apply --index --reject - Checking patch tests/main.cpp... Checking patch tests/test_config.cpp... Checking patch tests/test_edges.cpp... Checking patch tests/test_node_sets.cpp... Checking patch tests/test_nodes.cpp... Checking patch tests/test_report_reader.cpp... Checking patch tests/test_selection.cpp... Applied patch tests/main.cpp cleanly. Applied patch tests/test_config.cpp cleanly. Applied patch tests/test_edges.cpp cleanly. Applied patch tests/test_node_sets.cpp cleanly. Applied patch tests/test_nodes.cpp cleanly. Applied patch tests/test_report_reader.cpp cleanly. Applied patch tests/test_selection.cpp cleanly. + GIT_COMMITTER_DATE=@1738627200 + GIT_AUTHOR_DATE=@1738627200 + /usr/bin/git commit -q -m 0004-Include-catch-catch_all.hpp-instead-of-catch-catch.h.patch --author 'rpm-build ' + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/0005-Link-Catch2-Catch2WithMain-instead-of-Catch2-Catch2.patch + /usr/bin/git apply --index --reject - Checking patch tests/CMakeLists.txt... Applied patch tests/CMakeLists.txt cleanly. + GIT_COMMITTER_DATE=@1738627200 + GIT_AUTHOR_DATE=@1738627200 + /usr/bin/git commit -q -m 0005-Link-Catch2-Catch2WithMain-instead-of-Catch2-Catch2.patch --author 'rpm-build ' + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/1.patch + /usr/bin/git apply --index --reject - Checking patch CMakeLists.txt... Applied patch CMakeLists.txt cleanly. + GIT_COMMITTER_DATE=@1738627200 + GIT_AUTHOR_DATE=@1738627200 + /usr/bin/git commit -q -m 1.patch --author 'rpm-build ' + rm -rf libsonata.egg-info + rm -rf extlib/Catch2 extlib/Highfive extlib/fmt extlib/nlohmann + echo '#include ' + echo '#include ' + echo '#include ' + sed -r -i 's/(-DEXTLIB_FROM_SUBMODULES=)ON/\1OFF/' setup.py + tomcli set pyproject.toml lists replace build-system.requires oldest-supported-numpy numpy + pushd tests/data ~/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/tests/data ~/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29 + rm nodes1.h5 edges1.h5 spikes.h5 somas.h5 elements.h5 + popd + RPM_EC=0 ~/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29 ++ jobs -p + exit 0 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.ADgDl1 + umask 022 + cd /builddir/build/BUILD/libsonata-0.1.29-build + cd libsonata-0.1.29 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/pyproject-wheeldir --output /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29-1.fc42.x86_64-pyproject-buildrequires Handling cmake from build-system.requires Requirement not satisfied: cmake Handling numpy from build-system.requires Requirement satisfied: numpy (installed: numpy 2.2.2) Handling setuptools from build-system.requires Requirement not satisfied: setuptools Handling wheel from build-system.requires Requirement not satisfied: wheel Exiting dependency generation pass: build backend + cat /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29-1.fc42.x86_64-pyproject-buildrequires + rm -rfv '*.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/libsonata-0.1.29-1.fc42.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: Copr repository 100% | 73.2 KiB/s | 1.5 KiB | 00m00s updates 100% | 98.7 KiB/s | 29.1 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 255.3 KiB/s | 3.8 KiB | 00m00s fedora 100% | 107.4 KiB/s | 29.1 KiB | 00m00s Repositories loaded. Package "cmake-3.31.5-1.fc42.x86_64" is already installed. Package "catch-devel-3.8.0-2.fc42.x86_64" is already installed. Package "highfive-devel-2.10.0-4.fc42.x86_64" is already installed. Package "fmt-devel-11.1.2-2.fc42.x86_64" is already installed. Package "pybind11-devel-2.13.6-2.fc42.x86_64" is already installed. Package "gcc-c++-15.0.1-0.6.fc42.x86_64" is already installed. Package "git-core-2.48.1-2.fc42.x86_64" is already installed. Package "hdf5-devel-1.14.5-2.fc42.x86_64" is already installed. Package "ninja-build-1.12.1-4.fc42.x86_64" is already installed. Package "optional-lite-devel-3.6.0-5.fc42.x86_64" is already installed. Package "pyproject-rpm-macros-1.16.4-2.fc42.noarch" is already installed. Package "python3-devel-3.13.1-4.fc42.x86_64" is already installed. Package "python3-h5py-3.12.1-5.fc42.x86_64" is already installed. Package "python3-numpy-1:2.2.2-2.fc42.x86_64" is already installed. Package "python3-packaging-24.2-3.fc42.noarch" is already installed. Package "python3-pytest-8.3.4-2.fc42.noarch" is already installed. Package "tomcli-0.8.0-2.fc42.noarch" is already installed. Package "variant-lite-devel-2.0.0-1.fc42.x86_64" is already installed. Package Arch Version Repository Size Installing: python3-cmake noarch 3.31.5-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 290.0 B python3-pip noarch 24.3.1-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 11.3 MiB python3-setuptools noarch 74.1.3-5.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 8.4 MiB python3-wheel noarch 1:0.45.1-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 541.9 KiB Transaction Summary: Installing: 4 packages Total size of inbound packages is 5 MiB. Need to download 0 B. After this operation, 20 MiB extra will be used (install 20 MiB, remove 0 B). [1/1] python3-cmake-0:3.31.5-1.fc42.noa 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [1/1] Total 100% | 0.0 B/s | 0.0 B | 00m00s [1/2] python3-pip-0:24.3.1-2.fc42.noarc 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [2/2] Total 100% | 0.0 B/s | 0.0 B | 00m00s [1/3] python3-setuptools-0:74.1.3-5.fc4 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [3/3] Total 100% | 0.0 B/s | 0.0 B | 00m00s [1/4] python3-wheel-1:0.45.1-3.fc42.noa 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [4/4] Total 100% | 0.0 B/s | 0.0 B | 00m00s Running transaction [1/6] Verify package files 100% | 285.0 B/s | 4.0 B | 00m00s [2/6] Prepare transaction 100% | 117.0 B/s | 4.0 B | 00m00s [3/6] Installing python3-wheel-1:0.45.1 100% | 34.3 MiB/s | 562.0 KiB | 00m00s [4/6] Installing python3-setuptools-0:7 100% | 225.3 MiB/s | 8.6 MiB | 00m00s [5/6] Installing python3-pip-0:24.3.1-2 100% | 193.6 MiB/s | 11.6 MiB | 00m00s [6/6] Installing python3-cmake-0:3.31.5 100% | 22.5 KiB/s | 944.0 B | 00m00s Warning: skipped OpenPGP checks for 4 packages from repository: http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch Complete! Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1738627200 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.Kwqog1 + umask 022 + cd /builddir/build/BUILD/libsonata-0.1.29-build + cd libsonata-0.1.29 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/pyproject-wheeldir --output /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29-1.fc42.x86_64-pyproject-buildrequires Handling cmake from build-system.requires Requirement satisfied: cmake (installed: cmake 3.31.5) Handling numpy from build-system.requires Requirement satisfied: numpy (installed: numpy 2.2.2) Handling setuptools from build-system.requires Requirement satisfied: setuptools (installed: setuptools 74.1.3) Handling wheel from build-system.requires Requirement satisfied: wheel (installed: wheel 0.45.1) Handling setuptools_scm from get_requires_for_build_wheel Requirement not satisfied: setuptools_scm Exiting dependency generation pass: get_requires_for_build_wheel + cat /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29-1.fc42.x86_64-pyproject-buildrequires + rm -rfv '*.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/libsonata-0.1.29-1.fc42.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: Copr repository 100% | 118.2 KiB/s | 1.5 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 201.5 KiB/s | 3.8 KiB | 00m00s fedora 100% | 101.8 KiB/s | 29.1 KiB | 00m00s updates 100% | 87.9 KiB/s | 29.1 KiB | 00m00s Repositories loaded. Package "cmake-3.31.5-1.fc42.x86_64" is already installed. Package "catch-devel-3.8.0-2.fc42.x86_64" is already installed. Package "highfive-devel-2.10.0-4.fc42.x86_64" is already installed. Package "fmt-devel-11.1.2-2.fc42.x86_64" is already installed. Package "pybind11-devel-2.13.6-2.fc42.x86_64" is already installed. Package "gcc-c++-15.0.1-0.6.fc42.x86_64" is already installed. Package "git-core-2.48.1-2.fc42.x86_64" is already installed. Package "hdf5-devel-1.14.5-2.fc42.x86_64" is already installed. Package "ninja-build-1.12.1-4.fc42.x86_64" is already installed. Package "optional-lite-devel-3.6.0-5.fc42.x86_64" is already installed. Package "pyproject-rpm-macros-1.16.4-2.fc42.noarch" is already installed. Package "python3-devel-3.13.1-4.fc42.x86_64" is already installed. Package "python3-cmake-3.31.5-1.fc42.noarch" is already installed. Package "python3-h5py-3.12.1-5.fc42.x86_64" is already installed. Package "python3-numpy-1:2.2.2-2.fc42.x86_64" is already installed. Package "python3-packaging-24.2-3.fc42.noarch" is already installed. Package "python3-pip-24.3.1-2.fc42.noarch" is already installed. Package "python3-pytest-8.3.4-2.fc42.noarch" is already installed. Package "python3-setuptools-74.1.3-5.fc42.noarch" is already installed. Package "python3-wheel-1:0.45.1-3.fc42.noarch" is already installed. Package "tomcli-0.8.0-2.fc42.noarch" is already installed. Package "variant-lite-devel-2.0.0-1.fc42.x86_64" is already installed. Package Arch Version Repository Size Installing: python3-setuptools_scm noarch 8.1.0-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 319.6 KiB Transaction Summary: Installing: 1 package Total size of inbound packages is 102 KiB. Need to download 0 B. After this operation, 320 KiB extra will be used (install 320 KiB, remove 0 B). [1/1] python3-setuptools_scm-0:8.1.0-2. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [1/1] Total 100% | 0.0 B/s | 0.0 B | 00m00s Running transaction [1/3] Verify package files 100% | 0.0 B/s | 1.0 B | 00m00s [2/3] Prepare transaction 100% | 47.0 B/s | 1.0 B | 00m00s [3/3] Installing python3-setuptools_scm 100% | 8.3 MiB/s | 339.3 KiB | 00m00s Warning: skipped OpenPGP checks for 1 package from repository: http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch Complete! Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1738627200 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.ELeKrc + umask 022 + cd /builddir/build/BUILD/libsonata-0.1.29-build + cd libsonata-0.1.29 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/pyproject-wheeldir --output /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29-1.fc42.x86_64-pyproject-buildrequires Handling cmake from build-system.requires Requirement satisfied: cmake (installed: cmake 3.31.5) Handling numpy from build-system.requires Requirement satisfied: numpy (installed: numpy 2.2.2) Handling setuptools from build-system.requires Requirement satisfied: setuptools (installed: setuptools 74.1.3) Handling wheel from build-system.requires Requirement satisfied: wheel (installed: wheel 0.45.1) Handling setuptools_scm from get_requires_for_build_wheel Requirement satisfied: setuptools_scm (installed: setuptools_scm 8.1.0) WARNING setuptools_scm.pyproject_reading toml section missing 'pyproject.toml does not contain a tool.setuptools_scm section' Traceback (most recent call last): File "/usr/lib/python3.13/site-packages/setuptools_scm/_integration/pyproject_reading.py", line 36, in read_pyproject section = defn.get("tool", {})[tool_name] ~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^ KeyError: 'setuptools_scm' running dist_info creating libsonata.egg-info writing libsonata.egg-info/PKG-INFO writing dependency_links to libsonata.egg-info/dependency_links.txt writing requirements to libsonata.egg-info/requires.txt writing top-level names to libsonata.egg-info/top_level.txt writing manifest file 'libsonata.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'extlib/nlohmann/json.hpp' warning: no files found matching '*' under directory 'extlib/fmt/include' warning: no files found matching '*' under directory 'extlib/fmt/src' warning: no files found matching '*' under directory 'extlib/fmt/support/cmake' warning: no files found matching 'extlib/fmt/CMakeLists.txt' warning: no files found matching 'extlib/fmt/*.rst' warning: no files found matching 'extlib/fmt/README.md' warning: no files found matching 'extlib/fmt/ChangeLog.md' warning: no files found matching '*' under directory 'extlib/HighFive/include' warning: no files found matching 'extlib/HighFive/CMakeLists.txt' warning: no files found matching 'extlib/HighFive/LICENSE' warning: no files found matching '*' under directory 'python/pybind11/include' warning: no files found matching '*.cmake' under directory 'python/pybind11/tools' warning: no files found matching 'python/pybind11/CMakeLists.txt' warning: no files found matching 'python/pybind11/LICENSE' adding license file 'COPYING' adding license file 'COPYING.LESSER' adding license file 'AUTHORS.txt' writing manifest file 'libsonata.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/libsonata-0.1.dev7.dist-info' Handling numpy>=1.17.3 from hook generated metadata: Requires-Dist (libsonata) Requirement satisfied: numpy>=1.17.3 (installed: numpy 2.2.2) Handling sphinx-bluebrain-theme; extra == "docs" from hook generated metadata: Requires-Dist (libsonata) Ignoring alien requirement: sphinx-bluebrain-theme; extra == "docs" + cat /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29-1.fc42.x86_64-pyproject-buildrequires + rm -rfv libsonata-0.1.dev7.dist-info/ removed 'libsonata-0.1.dev7.dist-info/top_level.txt' removed 'libsonata-0.1.dev7.dist-info/METADATA' removed 'libsonata-0.1.dev7.dist-info/COPYING' removed 'libsonata-0.1.dev7.dist-info/COPYING.LESSER' removed 'libsonata-0.1.dev7.dist-info/AUTHORS.txt' removed directory 'libsonata-0.1.dev7.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/libsonata-0.1.29-1.fc42.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: Copr repository 100% | 109.8 KiB/s | 1.5 KiB | 00m00s updates 100% | 95.1 KiB/s | 29.1 KiB | 00m00s fedora 100% | 102.5 KiB/s | 29.1 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 174.0 KiB/s | 3.8 KiB | 00m00s Repositories loaded. Nothing to do. Package "cmake-3.31.5-1.fc42.x86_64" is already installed. Package "catch-devel-3.8.0-2.fc42.x86_64" is already installed. Package "highfive-devel-2.10.0-4.fc42.x86_64" is already installed. Package "fmt-devel-11.1.2-2.fc42.x86_64" is already installed. Package "pybind11-devel-2.13.6-2.fc42.x86_64" is already installed. Package "gcc-c++-15.0.1-0.6.fc42.x86_64" is already installed. Package "git-core-2.48.1-2.fc42.x86_64" is already installed. Package "hdf5-devel-1.14.5-2.fc42.x86_64" is already installed. Package "ninja-build-1.12.1-4.fc42.x86_64" is already installed. Package "optional-lite-devel-3.6.0-5.fc42.x86_64" is already installed. Package "pyproject-rpm-macros-1.16.4-2.fc42.noarch" is already installed. Package "python3-devel-3.13.1-4.fc42.x86_64" is already installed. Package "python3-cmake-3.31.5-1.fc42.noarch" is already installed. Package "python3-h5py-3.12.1-5.fc42.x86_64" is already installed. Package "python3-numpy-1:2.2.2-2.fc42.x86_64" is already installed. Package "python3-numpy-1:2.2.2-2.fc42.x86_64" is already installed. Package "python3-packaging-24.2-3.fc42.noarch" is already installed. Package "python3-pip-24.3.1-2.fc42.noarch" is already installed. Package "python3-pytest-8.3.4-2.fc42.noarch" is already installed. Package "python3-setuptools-74.1.3-5.fc42.noarch" is already installed. Package "python3-setuptools_scm-8.1.0-2.fc42.noarch" is already installed. Package "python3-wheel-1:0.45.1-3.fc42.noarch" is already installed. Package "tomcli-0.8.0-2.fc42.noarch" is already installed. Package "variant-lite-devel-2.0.0-1.fc42.x86_64" is already installed. Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1738627200 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.5NmhjW + umask 022 + cd /builddir/build/BUILD/libsonata-0.1.29-build + cd libsonata-0.1.29 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/pyproject-wheeldir --output /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29-1.fc42.x86_64-pyproject-buildrequires Handling cmake from build-system.requires Requirement satisfied: cmake (installed: cmake 3.31.5) Handling numpy from build-system.requires Requirement satisfied: numpy (installed: numpy 2.2.2) Handling setuptools from build-system.requires Requirement satisfied: setuptools (installed: setuptools 74.1.3) Handling wheel from build-system.requires Requirement satisfied: wheel (installed: wheel 0.45.1) Handling setuptools_scm from get_requires_for_build_wheel Requirement satisfied: setuptools_scm (installed: setuptools_scm 8.1.0) WARNING setuptools_scm.pyproject_reading toml section missing 'pyproject.toml does not contain a tool.setuptools_scm section' Traceback (most recent call last): File "/usr/lib/python3.13/site-packages/setuptools_scm/_integration/pyproject_reading.py", line 36, in read_pyproject section = defn.get("tool", {})[tool_name] ~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^ KeyError: 'setuptools_scm' running dist_info writing libsonata.egg-info/PKG-INFO writing dependency_links to libsonata.egg-info/dependency_links.txt writing requirements to libsonata.egg-info/requires.txt writing top-level names to libsonata.egg-info/top_level.txt reading manifest template 'MANIFEST.in' warning: no files found matching 'extlib/nlohmann/json.hpp' warning: no files found matching '*' under directory 'extlib/fmt/include' warning: no files found matching '*' under directory 'extlib/fmt/src' warning: no files found matching '*' under directory 'extlib/fmt/support/cmake' warning: no files found matching 'extlib/fmt/CMakeLists.txt' warning: no files found matching 'extlib/fmt/*.rst' warning: no files found matching 'extlib/fmt/README.md' warning: no files found matching 'extlib/fmt/ChangeLog.md' warning: no files found matching '*' under directory 'extlib/HighFive/include' warning: no files found matching 'extlib/HighFive/CMakeLists.txt' warning: no files found matching 'extlib/HighFive/LICENSE' warning: no files found matching '*' under directory 'python/pybind11/include' warning: no files found matching '*.cmake' under directory 'python/pybind11/tools' warning: no files found matching 'python/pybind11/CMakeLists.txt' warning: no files found matching 'python/pybind11/LICENSE' adding license file 'COPYING' adding license file 'COPYING.LESSER' adding license file 'AUTHORS.txt' writing manifest file 'libsonata.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/libsonata-0.1.dev7.dist-info' Handling numpy>=1.17.3 from hook generated metadata: Requires-Dist (libsonata) Requirement satisfied: numpy>=1.17.3 (installed: numpy 2.2.2) Handling sphinx-bluebrain-theme; extra == "docs" from hook generated metadata: Requires-Dist (libsonata) Ignoring alien requirement: sphinx-bluebrain-theme; extra == "docs" + cat /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29-1.fc42.x86_64-pyproject-buildrequires + rm -rfv libsonata-0.1.dev7.dist-info/ removed 'libsonata-0.1.dev7.dist-info/top_level.txt' removed 'libsonata-0.1.dev7.dist-info/METADATA' removed 'libsonata-0.1.dev7.dist-info/COPYING' removed 'libsonata-0.1.dev7.dist-info/COPYING.LESSER' removed 'libsonata-0.1.dev7.dist-info/AUTHORS.txt' removed directory 'libsonata-0.1.dev7.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.UZhViU + umask 022 + cd /builddir/build/BUILD/libsonata-0.1.29-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd libsonata-0.1.29 + export CMAKE_GENERATOR=Ninja + CMAKE_GENERATOR=Ninja + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + /usr/bin/cmake -S . -B redhat-linux-build -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DCMAKE_INSTALL_FULL_SBINDIR:PATH=/usr/bin -DCMAKE_INSTALL_SBINDIR:PATH=bin -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -DEXTLIB_FROM_SUBMODULES:BOOL=OFF -DSONATA_CXX_WARNINGS:BOOL=OFF -DSONATA_PYTHON:BOOL=OFF -DSONATA_TESTS:BOOL=ON -DSONATA_VERSION=0.1.29 -- The C compiler identification is GNU 15.0.1 -- The CXX compiler identification is GNU 15.0.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- HIGHFIVE 2.10.0: (Re)Detecting Highfive dependencies (HIGHFIVE_USE_INSTALL_DEPS=NO) -- Found HDF5: /usr/lib64/libhdf5.so (found version "1.14.5") CMake Warning (dev) at /usr/lib64/cmake/HighFive/HighFiveTargetDeps.cmake:55 (find_package): Policy CMP0167 is not set: The FindBoost module is removed. Run "cmake --help-policy CMP0167" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): /usr/lib64/cmake/HighFive/HighFiveConfig.cmake:93 (include) CMakeLists.txt:83 (find_package) This warning is for project developers. Use -Wno-dev to suppress it. -- Found Boost: /usr/include (found version "1.83.0") found components: system serialization -- Found nlohmann_json: /usr/share/cmake/nlohmann_json/nlohmann_jsonConfig.cmake (found version "3.11.3") -- Configuring done (0.6s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_CXX_FLAGS_RELEASE CMAKE_C_FLAGS_RELEASE CMAKE_Fortran_FLAGS_RELEASE CMAKE_INSTALL_DO_STRIP CMAKE_VERBOSE_MAKEFILE INCLUDE_INSTALL_DIR LIB_INSTALL_DIR LIB_SUFFIX SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/redhat-linux-build + /usr/bin/cmake --build redhat-linux-build -j4 --verbose Change Dir: '/builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/redhat-linux-build' Run Build Command(s): /usr/bin/ninja-build -v -j 4 [1/37] /usr/bin/g++ -DBOOST_ALL_NO_LIB -DFMT_HEADER_ONLY=1 -DH5_USE_BOOST -DHIGHFIVE_HAS_CONCEPTS=0 -DMPI_NO_CPPBIND -DSONATA_DLL -DSONATA_DLL_EXPORTS -Dsonata_shared_EXPORTS -I/builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -fPIC -fvisibility=hidden -Wall -Wextra -pedantic -MD -MT CMakeFiles/sonata_shared.dir/src/common.cpp.o -MF CMakeFiles/sonata_shared.dir/src/common.cpp.o.d -o CMakeFiles/sonata_shared.dir/src/common.cpp.o -c /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/src/common.cpp [2/37] /usr/bin/g++ -DBOOST_ALL_NO_LIB -DFMT_HEADER_ONLY=1 -DH5_USE_BOOST -DHIGHFIVE_HAS_CONCEPTS=0 -DMPI_NO_CPPBIND -DSONATA_DLL -DSONATA_DLL_EXPORTS -Dsonata_shared_EXPORTS -I/builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -fPIC -fvisibility=hidden -Wall -Wextra -pedantic -MD -MT CMakeFiles/sonata_shared.dir/src/hdf5_mutex.cpp.o -MF CMakeFiles/sonata_shared.dir/src/hdf5_mutex.cpp.o.d -o CMakeFiles/sonata_shared.dir/src/hdf5_mutex.cpp.o -c /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/src/hdf5_mutex.cpp [3/37] /usr/bin/g++ -DBOOST_ALL_NO_LIB -DFMT_HEADER_ONLY=1 -DH5_USE_BOOST -DHIGHFIVE_HAS_CONCEPTS=0 -DMPI_NO_CPPBIND -DSONATA_DLL -DSONATA_DLL_EXPORTS -Dsonata_shared_EXPORTS -I/builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -fPIC -fvisibility=hidden -Wall -Wextra -pedantic -MD -MT CMakeFiles/sonata_shared.dir/src/edge_index.cpp.o -MF CMakeFiles/sonata_shared.dir/src/edge_index.cpp.o.d -o CMakeFiles/sonata_shared.dir/src/edge_index.cpp.o -c /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/src/edge_index.cpp [4/37] /usr/bin/g++ -DBOOST_ALL_NO_LIB -DFMT_HEADER_ONLY=1 -DH5_USE_BOOST -DHIGHFIVE_HAS_CONCEPTS=0 -DMPI_NO_CPPBIND -DSONATA_DLL -DSONATA_DLL_EXPORTS -Dsonata_shared_EXPORTS -I/builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -fPIC -fvisibility=hidden -Wall -Wextra -pedantic -MD -MT CMakeFiles/sonata_shared.dir/src/hdf5_reader.cpp.o -MF CMakeFiles/sonata_shared.dir/src/hdf5_reader.cpp.o.d -o CMakeFiles/sonata_shared.dir/src/hdf5_reader.cpp.o -c 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-Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -MD -MT tests/CMakeFiles/unittests.dir/test_node_sets.cpp.o -MF tests/CMakeFiles/unittests.dir/test_node_sets.cpp.o.d -o tests/CMakeFiles/unittests.dir/test_node_sets.cpp.o -c /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/tests/test_node_sets.cpp [31/37] /usr/bin/g++ -DFMT_HEADER_ONLY=1 -I/builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -fPIC -fvisibility=hidden -Wall -Wextra -pedantic -MD -MT CMakeFiles/sonata_static.dir/src/report_reader.cpp.o -MF CMakeFiles/sonata_static.dir/src/report_reader.cpp.o.d -o CMakeFiles/sonata_static.dir/src/report_reader.cpp.o -c /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/src/report_reader.cpp [32/37] /usr/bin/g++ -DBOOST_ALL_NO_LIB -DH5_USE_BOOST -DHIGHFIVE_HAS_CONCEPTS=0 -DMPI_NO_CPPBIND -DSONATA_DLL -I/builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -MD -MT tests/CMakeFiles/unittests.dir/test_nodes.cpp.o -MF tests/CMakeFiles/unittests.dir/test_nodes.cpp.o.d -o tests/CMakeFiles/unittests.dir/test_nodes.cpp.o -c /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/tests/test_nodes.cpp [33/37] : && /usr/bin/cmake -E rm -f libsonata.a && /usr/bin/ar qc libsonata.a CMakeFiles/sonata_static.dir/src/common.cpp.o CMakeFiles/sonata_static.dir/src/config.cpp.o CMakeFiles/sonata_static.dir/src/edge_index.cpp.o CMakeFiles/sonata_static.dir/src/edges.cpp.o CMakeFiles/sonata_static.dir/src/hdf5_mutex.cpp.o CMakeFiles/sonata_static.dir/src/hdf5_reader.cpp.o CMakeFiles/sonata_static.dir/src/node_sets.cpp.o CMakeFiles/sonata_static.dir/src/nodes.cpp.o CMakeFiles/sonata_static.dir/src/population.cpp.o CMakeFiles/sonata_static.dir/src/report_reader.cpp.o CMakeFiles/sonata_static.dir/src/selection.cpp.o CMakeFiles/sonata_static.dir/src/utils.cpp.o CMakeFiles/sonata_static.dir/src/version.cpp.o && /usr/bin/ranlib libsonata.a && : [34/37] /usr/bin/g++ -DBOOST_ALL_NO_LIB -DH5_USE_BOOST -DHIGHFIVE_HAS_CONCEPTS=0 -DMPI_NO_CPPBIND -DSONATA_DLL -I/builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -MD -MT tests/CMakeFiles/unittests.dir/test_selection.cpp.o -MF tests/CMakeFiles/unittests.dir/test_selection.cpp.o.d -o tests/CMakeFiles/unittests.dir/test_selection.cpp.o -c /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/tests/test_selection.cpp [35/37] /usr/bin/g++ -DBOOST_ALL_NO_LIB -DH5_USE_BOOST -DHIGHFIVE_HAS_CONCEPTS=0 -DMPI_NO_CPPBIND -DSONATA_DLL -I/builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -MD -MT tests/CMakeFiles/unittests.dir/test_report_reader.cpp.o -MF tests/CMakeFiles/unittests.dir/test_report_reader.cpp.o.d -o tests/CMakeFiles/unittests.dir/test_report_reader.cpp.o -c /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/tests/test_report_reader.cpp In file included from /usr/include/catch2/benchmark/catch_benchmark.hpp:14, from /usr/include/catch2/benchmark/catch_benchmark_all.hpp:24, from /usr/include/catch2/catch_all.hpp:25, from /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/tests/test_report_reader.cpp:1: /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/tests/test_report_reader.cpp: In function ‘void testTimes(const std::vector&, double, double, int)’: /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/tests/test_report_reader.cpp:8:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 8 | REQUIRE(size == vec.size()); | ~~~~~^~~~~~~~~~~~~ /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/tests/test_report_reader.cpp:9:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 9 | for (int i = 0; i < vec.size(); ++i) { | ~~^~~~~~~~~~~~ [36/37] /usr/bin/g++ -DBOOST_ALL_NO_LIB -DH5_USE_BOOST -DHIGHFIVE_HAS_CONCEPTS=0 -DMPI_NO_CPPBIND -DSONATA_DLL -I/builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -MD -MT tests/CMakeFiles/unittests.dir/test_config.cpp.o -MF tests/CMakeFiles/unittests.dir/test_config.cpp.o.d -o tests/CMakeFiles/unittests.dir/test_config.cpp.o -c /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/tests/test_config.cpp In file included from /usr/include/catch2/catch_test_macros.hpp:11, from /usr/include/catch2/catch_template_test_macros.hpp:20, from /usr/include/catch2/catch_all.hpp:37, from /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/tests/test_config.cpp:1: /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/tests/test_config.cpp: In function ‘void CATCH2_INTERNAL_TEST_0()’: /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/tests/test_config.cpp:50:44: warning: ignoring return value of ‘static nlohmann::json_abi_v3_11_3::basic_json nlohmann::json_abi_v3_11_3::basic_json::parse(InputType&&, parser_callback_t, bool, bool) [with InputType = const std::__cxx11::basic_string&; ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long int; NumberUnsignedType = long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::json_abi_v3_11_3::adl_serializer; BinaryType = std::vector; CustomBaseClass = void; parser_callback_t = std::function&)>]’, declared with attribute ‘warn_unused_result’ [-Wunused-result] 50 | CHECK_NOTHROW(nlohmann::json::parse(config.getExpandedJSON())); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/tests/test_config.cpp:3: /usr/include/nlohmann/json.hpp:4015:23: note: declared here 4015 | static basic_json parse(InputType&& i, | ^~~~~ /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/tests/test_config.cpp: In function ‘void CATCH2_INTERNAL_TEST_5()’: /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/tests/test_config.cpp:389:44: warning: ignoring return value of ‘static nlohmann::json_abi_v3_11_3::basic_json nlohmann::json_abi_v3_11_3::basic_json::parse(InputType&&, parser_callback_t, bool, bool) [with InputType = const std::__cxx11::basic_string&; ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long int; NumberUnsignedType = long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::json_abi_v3_11_3::adl_serializer; BinaryType = std::vector; CustomBaseClass = void; parser_callback_t = std::function&)>]’, declared with attribute ‘warn_unused_result’ [-Wunused-result] 389 | CHECK_NOTHROW(nlohmann::json::parse(config.getExpandedJSON())); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/nlohmann/json.hpp:4015:23: note: declared here 4015 | static basic_json parse(InputType&& i, | ^~~~~ [37/37] : && /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=tests/CMakeFiles/unittests.dir/link.d tests/CMakeFiles/unittests.dir/main.cpp.o tests/CMakeFiles/unittests.dir/test_config.cpp.o tests/CMakeFiles/unittests.dir/test_edges.cpp.o tests/CMakeFiles/unittests.dir/test_node_sets.cpp.o tests/CMakeFiles/unittests.dir/test_nodes.cpp.o tests/CMakeFiles/unittests.dir/test_report_reader.cpp.o tests/CMakeFiles/unittests.dir/test_selection.cpp.o -o tests/unittests -Wl,-rpath,/builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/redhat-linux-build libsonata.so.0.1.29 /usr/lib64/libCatch2Main.so.3.8.0 /usr/lib64/libhdf5.so /usr/lib64/libCatch2.so.3.8.0 && cd /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/redhat-linux-build/tests && /usr/bin/cmake -D TEST_TARGET=unittests -D TEST_EXECUTABLE=/builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/redhat-linux-build/tests/unittests -D TEST_EXECUTOR= -D TEST_WORKING_DIR=/builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/tests -D TEST_SPEC= -D TEST_EXTRA_ARGS= -D "TEST_PROPERTIES=SKIP_RETURN_CODE;4" -D TEST_PREFIX= -D TEST_SUFFIX= -D TEST_LIST=unittests_TESTS -D TEST_REPORTER= -D TEST_OUTPUT_DIR= -D TEST_OUTPUT_PREFIX= -D TEST_OUTPUT_SUFFIX= -D TEST_DL_PATHS= -D TEST_DL_FRAMEWORK_PATHS= -D CTEST_FILE=/builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/redhat-linux-build/tests/unittests-b12d07c_tests.cmake -D ADD_TAGS_AS_LABELS=FALSE -P /usr/lib64/cmake/Catch2/CatchAddTests.cmake + export SETUPTOOLS_SCM_PRETEND_VERSION=0.1.29 + SETUPTOOLS_SCM_PRETEND_VERSION=0.1.29 + export SONATA_BUILD_TYPE=RelWithDebInfo + SONATA_BUILD_TYPE=RelWithDebInfo + export VERBOSE= + VERBOSE= + mkdir -p /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/.pyproject-builddir + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/.pyproject-builddir + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_wheel.py /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/pyproject-wheeldir Processing /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29 Preparing metadata (pyproject.toml): started Running command Preparing metadata (pyproject.toml) WARNING setuptools_scm.pyproject_reading toml section missing 'pyproject.toml does not contain a tool.setuptools_scm section' Traceback (most recent call last): File "/usr/lib/python3.13/site-packages/setuptools_scm/_integration/pyproject_reading.py", line 36, in read_pyproject section = defn.get("tool", {})[tool_name] ~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^ KeyError: 'setuptools_scm' running dist_info creating /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/.pyproject-builddir/pip-modern-metadata-c2airsjm/libsonata.egg-info writing /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/.pyproject-builddir/pip-modern-metadata-c2airsjm/libsonata.egg-info/PKG-INFO writing dependency_links to /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/.pyproject-builddir/pip-modern-metadata-c2airsjm/libsonata.egg-info/dependency_links.txt writing requirements to /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/.pyproject-builddir/pip-modern-metadata-c2airsjm/libsonata.egg-info/requires.txt writing top-level names to /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/.pyproject-builddir/pip-modern-metadata-c2airsjm/libsonata.egg-info/top_level.txt writing manifest file '/builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/.pyproject-builddir/pip-modern-metadata-c2airsjm/libsonata.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'extlib/nlohmann/json.hpp' warning: no files found matching '*' under directory 'extlib/fmt/include' warning: no files found matching '*' under directory 'extlib/fmt/src' warning: no files found matching '*' under directory 'extlib/fmt/support/cmake' warning: no files found matching 'extlib/fmt/CMakeLists.txt' warning: no files found matching 'extlib/fmt/*.rst' warning: no files found matching 'extlib/fmt/README.md' warning: no files found matching 'extlib/fmt/ChangeLog.md' warning: no files found matching '*' under directory 'extlib/HighFive/include' warning: no files found matching 'extlib/HighFive/CMakeLists.txt' warning: no files found matching 'extlib/HighFive/LICENSE' warning: no files found matching '*' under directory 'python/pybind11/include' warning: no files found matching '*.cmake' under directory 'python/pybind11/tools' warning: no files found matching 'python/pybind11/CMakeLists.txt' warning: no files found matching 'python/pybind11/LICENSE' adding license file 'COPYING' adding license file 'COPYING.LESSER' adding license file 'AUTHORS.txt' writing manifest file '/builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/.pyproject-builddir/pip-modern-metadata-c2airsjm/libsonata.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/.pyproject-builddir/pip-modern-metadata-c2airsjm/libsonata-0.1.29.dist-info' Preparing metadata (pyproject.toml): finished with status 'done' Building wheels for collected packages: libsonata Building wheel for libsonata (pyproject.toml): started Running command Building wheel for libsonata (pyproject.toml) WARNING setuptools_scm.pyproject_reading toml section missing 'pyproject.toml does not contain a tool.setuptools_scm section' Traceback (most recent call last): File "/usr/lib/python3.13/site-packages/setuptools_scm/_integration/pyproject_reading.py", line 36, in read_pyproject section = defn.get("tool", {})[tool_name] ~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^ KeyError: 'setuptools_scm' running bdist_wheel running build running build_py creating build creating build/lib.linux-x86_64-cpython-313 creating build/lib.linux-x86_64-cpython-313/libsonata copying python/libsonata/__init__.py -> build/lib.linux-x86_64-cpython-313/libsonata running build_ext Re-run cmake no build system arguments -- The C compiler identification is GNU 15.0.1 -- The CXX compiler identification is GNU 15.0.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- HIGHFIVE 2.10.0: (Re)Detecting Highfive dependencies (HIGHFIVE_USE_INSTALL_DEPS=NO) -- Found HDF5: /usr/lib64/libhdf5.so (found version "1.14.5") CMake Warning (dev) at /usr/lib64/cmake/HighFive/HighFiveTargetDeps.cmake:55 (find_package): Policy CMP0167 is not set: The FindBoost module is removed. Run "cmake --help-policy CMP0167" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): /usr/lib64/cmake/HighFive/HighFiveConfig.cmake:93 (include) CMakeLists.txt:83 (find_package) This warning is for project developers. Use -Wno-dev to suppress it. -- Found Boost: /usr/include (found version "1.83.0") found components: system serialization -- Found nlohmann_json: /usr/share/cmake/nlohmann_json/nlohmann_jsonConfig.cmake (found version "3.11.3") CMake Warning (dev) at /usr/share/cmake/pybind11/FindPythonLibsNew.cmake:101 (message): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning, or preferably upgrade to using FindPython, either by calling it explicitly before pybind11, or by setting PYBIND11_FINDPYTHON ON before pybind11. Call Stack (most recent call first): /usr/share/cmake/pybind11/pybind11Tools.cmake:50 (find_package) /usr/share/cmake/pybind11/pybind11Common.cmake:228 (include) /usr/share/cmake/pybind11/pybind11Config.cmake:250 (include) python/CMakeLists.txt:6 (find_package) This warning is for project developers. Use -Wno-dev to suppress it. -- Found PythonInterp: /usr/bin/python3 (found suitable version "3.13.1", minimum required is "3.7") -- Found PythonLibs: /usr/lib64/libpython3.13.so -- Performing Test HAS_FLTO -- Performing Test HAS_FLTO - Success -- Found pybind11: /usr/include (found version "2.13.6") -- Warning: this does not have an effect - use NO_SYSTEM_FROM_IMPORTED if using imported targets -- Configuring done (0.7s) -- Generating done (0.0s) -- Build files have been written to: /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/build/temp.linux-x86_64-cpython-313 Change Dir: '/builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/build/temp.linux-x86_64-cpython-313' Run Build Command(s): /usr/bin/ninja-build -v -j4 sonata_python [1/16] /usr/bin/g++ -DFMT_HEADER_ONLY=1 -I/builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DVERSION_INFO=\"0.1.29\" -O2 -g -DNDEBUG -std=gnu++17 -fPIC -fvisibility=hidden -Wall -Wextra -pedantic -MD -MT CMakeFiles/sonata_static.dir/src/common.cpp.o -MF CMakeFiles/sonata_static.dir/src/common.cpp.o.d -o CMakeFiles/sonata_static.dir/src/common.cpp.o -c /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/src/common.cpp [2/16] /usr/bin/g++ -DFMT_HEADER_ONLY=1 -I/builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DVERSION_INFO=\"0.1.29\" -O2 -g -DNDEBUG -std=gnu++17 -fPIC -fvisibility=hidden -Wall -Wextra -pedantic -MD -MT CMakeFiles/sonata_static.dir/src/hdf5_mutex.cpp.o -MF CMakeFiles/sonata_static.dir/src/hdf5_mutex.cpp.o.d -o CMakeFiles/sonata_static.dir/src/hdf5_mutex.cpp.o -c /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/src/hdf5_mutex.cpp [3/16] /usr/bin/g++ -DFMT_HEADER_ONLY=1 -I/builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DVERSION_INFO=\"0.1.29\" -O2 -g -DNDEBUG -std=gnu++17 -fPIC -fvisibility=hidden -Wall -Wextra -pedantic -MD -MT CMakeFiles/sonata_static.dir/src/edge_index.cpp.o -MF CMakeFiles/sonata_static.dir/src/edge_index.cpp.o.d -o CMakeFiles/sonata_static.dir/src/edge_index.cpp.o -c /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/src/edge_index.cpp [4/16] /usr/bin/g++ -DFMT_HEADER_ONLY=1 -I/builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DVERSION_INFO=\"0.1.29\" -O2 -g -DNDEBUG -std=gnu++17 -fPIC -fvisibility=hidden -Wall -Wextra -pedantic -MD -MT CMakeFiles/sonata_static.dir/src/hdf5_reader.cpp.o -MF CMakeFiles/sonata_static.dir/src/hdf5_reader.cpp.o.d -o CMakeFiles/sonata_static.dir/src/hdf5_reader.cpp.o -c /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/src/hdf5_reader.cpp [5/16] /usr/bin/g++ -DFMT_HEADER_ONLY=1 -I/builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DVERSION_INFO=\"0.1.29\" -O2 -g -DNDEBUG -std=gnu++17 -fPIC -fvisibility=hidden -Wall -Wextra -pedantic -MD -MT CMakeFiles/sonata_static.dir/src/edges.cpp.o -MF CMakeFiles/sonata_static.dir/src/edges.cpp.o.d -o CMakeFiles/sonata_static.dir/src/edges.cpp.o -c /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/src/edges.cpp [6/16] /usr/bin/g++ -DFMT_HEADER_ONLY=1 -I/builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DVERSION_INFO=\"0.1.29\" -O2 -g -DNDEBUG -std=gnu++17 -fPIC -fvisibility=hidden -Wall -Wextra -pedantic -MD -MT CMakeFiles/sonata_static.dir/src/node_sets.cpp.o -MF CMakeFiles/sonata_static.dir/src/node_sets.cpp.o.d -o CMakeFiles/sonata_static.dir/src/node_sets.cpp.o -c /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/src/node_sets.cpp [7/16] /usr/bin/g++ -DFMT_HEADER_ONLY=1 -I/builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer 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-DNDEBUG -std=gnu++17 -fPIC -fvisibility=hidden -Wall -Wextra -pedantic -MD -MT CMakeFiles/sonata_static.dir/src/nodes.cpp.o -MF CMakeFiles/sonata_static.dir/src/nodes.cpp.o.d -o CMakeFiles/sonata_static.dir/src/nodes.cpp.o -c /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/src/nodes.cpp [9/16] /usr/bin/g++ -DFMT_HEADER_ONLY=1 -I/builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DVERSION_INFO=\"0.1.29\" -O2 -g -DNDEBUG -std=gnu++17 -fPIC -fvisibility=hidden -Wall -Wextra -pedantic -MD -MT CMakeFiles/sonata_static.dir/src/utils.cpp.o -MF CMakeFiles/sonata_static.dir/src/utils.cpp.o.d -o CMakeFiles/sonata_static.dir/src/utils.cpp.o -c /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/src/utils.cpp [10/16] /usr/bin/g++ -DFMT_HEADER_ONLY=1 -I/builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DVERSION_INFO=\"0.1.29\" -O2 -g -DNDEBUG -std=gnu++17 -fPIC -fvisibility=hidden -Wall -Wextra -pedantic -MD -MT CMakeFiles/sonata_static.dir/src/version.cpp.o -MF CMakeFiles/sonata_static.dir/src/version.cpp.o.d -o CMakeFiles/sonata_static.dir/src/version.cpp.o -c /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/build/temp.linux-x86_64-cpython-313/src/version.cpp [11/16] /usr/bin/g++ -DFMT_HEADER_ONLY=1 -I/builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DVERSION_INFO=\"0.1.29\" -O2 -g -DNDEBUG -std=gnu++17 -fPIC -fvisibility=hidden -Wall -Wextra -pedantic -MD -MT CMakeFiles/sonata_static.dir/src/selection.cpp.o -MF CMakeFiles/sonata_static.dir/src/selection.cpp.o.d -o CMakeFiles/sonata_static.dir/src/selection.cpp.o -c /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/src/selection.cpp [12/16] /usr/bin/g++ -DFMT_HEADER_ONLY=1 -I/builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DVERSION_INFO=\"0.1.29\" -O2 -g -DNDEBUG -std=gnu++17 -fPIC -fvisibility=hidden -Wall -Wextra -pedantic -MD -MT CMakeFiles/sonata_static.dir/src/config.cpp.o -MF CMakeFiles/sonata_static.dir/src/config.cpp.o.d -o CMakeFiles/sonata_static.dir/src/config.cpp.o -c /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/src/config.cpp [13/16] /usr/bin/g++ -DFMT_HEADER_ONLY=1 -I/builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DVERSION_INFO=\"0.1.29\" -O2 -g -DNDEBUG -std=gnu++17 -fPIC -fvisibility=hidden -Wall -Wextra -pedantic -MD -MT CMakeFiles/sonata_static.dir/src/report_reader.cpp.o -MF CMakeFiles/sonata_static.dir/src/report_reader.cpp.o.d -o CMakeFiles/sonata_static.dir/src/report_reader.cpp.o -c /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/src/report_reader.cpp [14/16] : && /usr/bin/cmake -E rm -f libsonata.a && /usr/bin/ar qc libsonata.a CMakeFiles/sonata_static.dir/src/common.cpp.o CMakeFiles/sonata_static.dir/src/config.cpp.o CMakeFiles/sonata_static.dir/src/edge_index.cpp.o CMakeFiles/sonata_static.dir/src/edges.cpp.o CMakeFiles/sonata_static.dir/src/hdf5_mutex.cpp.o CMakeFiles/sonata_static.dir/src/hdf5_reader.cpp.o CMakeFiles/sonata_static.dir/src/node_sets.cpp.o CMakeFiles/sonata_static.dir/src/nodes.cpp.o CMakeFiles/sonata_static.dir/src/population.cpp.o CMakeFiles/sonata_static.dir/src/report_reader.cpp.o CMakeFiles/sonata_static.dir/src/selection.cpp.o CMakeFiles/sonata_static.dir/src/utils.cpp.o CMakeFiles/sonata_static.dir/src/version.cpp.o && /usr/bin/ranlib libsonata.a && : [15/16] /usr/bin/g++ -DBOOST_ALL_NO_LIB -DFMT_HEADER_ONLY=1 -DH5_USE_BOOST -DHIGHFIVE_HAS_CONCEPTS=0 -DMPI_NO_CPPBIND -Dsonata_python_EXPORTS -I/builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/include -isystem /usr/include/python3.13 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DVERSION_INFO=\"0.1.29\" -O2 -g -DNDEBUG -std=gnu++17 -fPIC -fvisibility=hidden -MD -MT python/CMakeFiles/sonata_python.dir/bindings.cpp.o -MF python/CMakeFiles/sonata_python.dir/bindings.cpp.o.d -o python/CMakeFiles/sonata_python.dir/bindings.cpp.o -c /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/python/bindings.cpp /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/python/bindings.cpp: In lambda function: /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/python/bindings.cpp:429:39: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘pybind11::ssize_t’ {aka ‘long int’} [-Wsign-compare] 429 | for (size_t i = 0; i < raw.shape(0); ++i) { | ~~^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/include/bbp/sonata/hdf5_reader.h:6, from /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/include/bbp/sonata/population.h:22, from /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/include/bbp/sonata/edges.h:13, from /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/include/bbp/sonata/config.h:19, from /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/python/bindings.cpp:6: /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/include/bbp/sonata/selection.h: In instantiation of ‘static bbp::sonata::Selection bbp::sonata::Selection::fromValues(Iterator, Iterator) [with Iterator = const long int*]’: /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/python/bindings.cpp:435:46: required from here 435 | return Selection::fromValues(raw.data(0), raw.data(raw.shape(0))); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/include/bbp/sonata/selection.h:60:15: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘long unsigned int’ [-Wsign-compare] 60 | if (v == std::get<1>(range)) { | ~~^~~~~~~~~~~~~~~~~~~~~ [16/16] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DVERSION_INFO=\"0.1.29\" -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=python/CMakeFiles/sonata_python.dir/link.d -shared -o /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/build/lib.linux-x86_64-cpython-313/libsonata/_libsonata.cpython-313-x86_64-linux-gnu.so python/CMakeFiles/sonata_python.dir/bindings.cpp.o libsonata.a /usr/lib64/libhdf5.so && : installing to build/bdist.linux-x86_64/wheel running install running install_lib creating build/bdist.linux-x86_64 creating build/bdist.linux-x86_64/wheel creating build/bdist.linux-x86_64/wheel/libsonata copying build/lib.linux-x86_64-cpython-313/libsonata/__init__.py -> build/bdist.linux-x86_64/wheel/./libsonata copying build/lib.linux-x86_64-cpython-313/libsonata/_libsonata.cpython-313-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/wheel/./libsonata running install_egg_info running egg_info creating python/libsonata.egg-info writing python/libsonata.egg-info/PKG-INFO writing dependency_links to python/libsonata.egg-info/dependency_links.txt writing requirements to python/libsonata.egg-info/requires.txt writing top-level names to python/libsonata.egg-info/top_level.txt writing manifest file 'python/libsonata.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'extlib/nlohmann/json.hpp' warning: no files found matching '*' under directory 'extlib/fmt/include' warning: no files found matching '*' under directory 'extlib/fmt/src' warning: no files found matching '*' under directory 'extlib/fmt/support/cmake' warning: no files found matching 'extlib/fmt/CMakeLists.txt' warning: no files found matching 'extlib/fmt/*.rst' warning: no files found matching 'extlib/fmt/README.md' warning: no files found matching 'extlib/fmt/ChangeLog.md' warning: no files found matching '*' under directory 'extlib/HighFive/include' warning: no files found matching 'extlib/HighFive/CMakeLists.txt' warning: no files found matching 'extlib/HighFive/LICENSE' warning: no files found matching '*' under directory 'python/pybind11/include' warning: no files found matching '*.cmake' under directory 'python/pybind11/tools' warning: no files found matching 'python/pybind11/CMakeLists.txt' warning: no files found matching 'python/pybind11/LICENSE' adding license file 'COPYING' adding license file 'COPYING.LESSER' adding license file 'AUTHORS.txt' writing manifest file 'python/libsonata.egg-info/SOURCES.txt' Copying python/libsonata.egg-info to build/bdist.linux-x86_64/wheel/./libsonata-0.1.29-py3.13.egg-info running install_scripts creating build/bdist.linux-x86_64/wheel/libsonata-0.1.29.dist-info/WHEEL creating '/builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/.pyproject-builddir/pip-wheel-bliywp8s/.tmp-8ffwqzs0/libsonata-0.1.29-cp313-cp313-linux_x86_64.whl' and adding 'build/bdist.linux-x86_64/wheel' to it adding 'libsonata/__init__.py' adding 'libsonata/_libsonata.cpython-313-x86_64-linux-gnu.so' adding 'libsonata-0.1.29.dist-info/AUTHORS.txt' adding 'libsonata-0.1.29.dist-info/COPYING' adding 'libsonata-0.1.29.dist-info/COPYING.LESSER' adding 'libsonata-0.1.29.dist-info/METADATA' adding 'libsonata-0.1.29.dist-info/WHEEL' adding 'libsonata-0.1.29.dist-info/top_level.txt' adding 'libsonata-0.1.29.dist-info/RECORD' removing build/bdist.linux-x86_64/wheel Building wheel for libsonata (pyproject.toml): finished with status 'done' Created wheel for libsonata: filename=libsonata-0.1.29-cp313-cp313-linux_x86_64.whl size=10892362 sha256=e0778c8553a038bc66b683857abfc4957dc773221e5ec1875e8ac036358c57cd Stored in directory: /builddir/.cache/pip/wheels/ca/a0/83/44387416232ce1a57e009216dc56a872696281c1874323f129 Successfully built libsonata + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.k9IT0P + umask 022 + cd /builddir/build/BUILD/libsonata-0.1.29-build + '[' /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT ++ dirname /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT + mkdir -p /builddir/build/BUILD/libsonata-0.1.29-build + mkdir /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd libsonata-0.1.29 + DESTDIR=/builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT + /usr/bin/cmake --install redhat-linux-build -- Install configuration: "" -- Installing: /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/lib64/libsonata.so.0.1.29 -- Installing: /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/lib64/libsonata.so.0.1 -- Installing: /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/lib64/libsonata.so -- Installing: /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/lib64/libsonata.a -- Installing: /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/include/bbp -- Installing: /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/include/bbp/sonata -- Installing: /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/include/bbp/sonata/common.h -- Installing: /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/include/bbp/sonata/config.h -- Installing: /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/include/bbp/sonata/edges.h -- Installing: /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/include/bbp/sonata/hdf5_reader.h -- Installing: /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/include/bbp/sonata/node_sets.h -- Installing: /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/include/bbp/sonata/nodes.h -- Installing: /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/include/bbp/sonata/optional.hpp -- Installing: /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/include/bbp/sonata/population.h -- Installing: /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/include/bbp/sonata/report_reader.h -- Installing: /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/include/bbp/sonata/selection.h -- Installing: /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/include/bbp/sonata/variant.hpp -- Installing: /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/share/sonata/CMake/sonata-config.cmake -- Installing: /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/share/sonata/CMake/sonata-targets.cmake -- Installing: /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/share/sonata/CMake/sonata-targets-noconfig.cmake + rm -rf /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT//usr/lib64/libsonata.a ++ ls /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/pyproject-wheeldir/libsonata-0.1.29-cp313-cp313-linux_x86_64.whl ++ xargs basename --multiple ++ sed -E 's/([^-]+)-([^-]+)-.+\.whl/\1==\2/' + specifier=libsonata==0.1.29 + '[' -z libsonata==0.1.29 ']' + TMPDIR=/builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/.pyproject-builddir + /usr/bin/python3 -m pip install --root /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT --prefix /usr --no-deps --disable-pip-version-check --progress-bar off --verbose --ignore-installed --no-warn-script-location --no-index --no-cache-dir --find-links /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/pyproject-wheeldir libsonata==0.1.29 Using pip 24.3.1 from /usr/lib/python3.13/site-packages/pip (python 3.13) Looking in links: /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/pyproject-wheeldir Processing ./pyproject-wheeldir/libsonata-0.1.29-cp313-cp313-linux_x86_64.whl Installing collected packages: libsonata Successfully installed libsonata-0.1.29 + '[' -d /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/bin ']' + rm -f /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29-1.fc42.x86_64-pyproject-ghost-distinfo + site_dirs=() + '[' -d /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/lib/python3.13/site-packages ']' + '[' /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/lib64/python3.13/site-packages '!=' /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/lib/python3.13/site-packages ']' + '[' -d /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/lib64/python3.13/site-packages ']' + site_dirs+=("/usr/lib64/python3.13/site-packages") + for site_dir in ${site_dirs[@]} + for distinfo in /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT$site_dir/*.dist-info + echo '%ghost /usr/lib64/python3.13/site-packages/libsonata-0.1.29.dist-info' + sed -i s/pip/rpm/ /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/lib64/python3.13/site-packages/libsonata-0.1.29.dist-info/INSTALLER + PYTHONPATH=/usr/lib/rpm/redhat + /usr/bin/python3 -B /usr/lib/rpm/redhat/pyproject_preprocess_record.py --buildroot /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT --record /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/lib64/python3.13/site-packages/libsonata-0.1.29.dist-info/RECORD --output /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29-1.fc42.x86_64-pyproject-record + rm -fv /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/lib64/python3.13/site-packages/libsonata-0.1.29.dist-info/RECORD removed '/builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/lib64/python3.13/site-packages/libsonata-0.1.29.dist-info/RECORD' + rm -fv /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/lib64/python3.13/site-packages/libsonata-0.1.29.dist-info/REQUESTED removed '/builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/lib64/python3.13/site-packages/libsonata-0.1.29.dist-info/REQUESTED' ++ wc -l /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29-1.fc42.x86_64-pyproject-ghost-distinfo ++ cut -f1 '-d ' + lines=1 + '[' 1 -ne 1 ']' + RPM_FILES_ESCAPE=4.19 + /usr/bin/python3 /usr/lib/rpm/redhat/pyproject_save_files.py --output-files /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29-1.fc42.x86_64-pyproject-files --output-modules /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29-1.fc42.x86_64-pyproject-modules --buildroot /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT --sitelib /usr/lib/python3.13/site-packages --sitearch /usr/lib64/python3.13/site-packages --python-version 3.13 --pyproject-record /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29-1.fc42.x86_64-pyproject-record --prefix /usr -l libsonata + /usr/bin/find-debuginfo -j4 --strict-build-id -m -i --build-id-seed 0.1.29-1.fc42 --unique-debug-suffix -0.1.29-1.fc42.x86_64 --unique-debug-src-base libsonata-0.1.29-1.fc42.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29 find-debuginfo: starting Extracting debug info from 2 files DWARF-compressing 2 files sepdebugcrcfix: Updated 2 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/libsonata-0.1.29-1.fc42.x86_64 find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4 Bytecompiling .py files below /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/lib64/python3.13 using python3.13 Bytecompiling .py files below /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/lib/debug/usr/lib64/python3.13 using python3.13 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-determinism --brp -j4 /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/lib64/python3.13/site-packages/libsonata/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents Scanned 36 directories and 63 files, processed 1 inodes, 1 modified (0 replaced + 1 rewritten), 0 unsupported format, 0 errors Reading /builddir/build/BUILD/libsonata-0.1.29-build/SPECPARTS/rpm-debuginfo.specpart Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.pVqFvQ + umask 022 + cd /builddir/build/BUILD/libsonata-0.1.29-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS ~/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/tests/data ~/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29 + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd libsonata-0.1.29 + pushd tests/data + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + PATH=/builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/lib64/python3.13/site-packages:/builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/lib/python3.13/site-packages + PYTHONDONTWRITEBYTECODE=1 + PYTEST_ADDOPTS=' --ignore=/builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/.pyproject-builddir' + PYTEST_XDIST_AUTO_NUM_WORKERS=4 + /usr/bin/python3 generate.py + popd ~/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29 + /usr/bin/ctest --test-dir redhat-linux-build --output-on-failure --force-new-ctest-process -j4 tests Internal ctest changing into directory: /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/redhat-linux-build Test project /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/redhat-linux-build Start 1: Selection Start 2: SpikeReader Start 3: SomaReportReader limits Start 4: SomaReportReader 1/30 Test #1: Selection ....................................... Passed 0.00 sec Start 5: ElementReportReader limits 2/30 Test #2: SpikeReader ..................................... Passed 0.01 sec 3/30 Test #3: SomaReportReader limits ......................... Passed 0.01 sec Start 6: ElementReportReader Start 7: NodePopulation 4/30 Test #4: SomaReportReader ................................ Passed 0.01 sec Start 8: NodePopulationMove 5/30 Test #5: ElementReportReader limits ...................... Passed 0.01 sec Start 9: NodePopulationSelectAll 6/30 Test #6: ElementReportReader ............................. Passed 0.00 sec Start 10: NodePopulationmatchAttributeValues 7/30 Test #8: NodePopulationMove .............................. Passed 0.00 sec Start 11: NodePopulationmatchAttributeValues - int8_t 8/30 Test #7: NodePopulation .................................. Passed 0.01 sec Start 12: NodePopulationmatchAttributeValues - uint8_t 9/30 Test #9: NodePopulationSelectAll ......................... Passed 0.01 sec Start 13: NodePopulationmatchAttributeValues - int16_t 10/30 Test #10: NodePopulationmatchAttributeValues .............. Passed 0.01 sec Start 14: NodePopulationmatchAttributeValues - uint16_t 11/30 Test #11: NodePopulationmatchAttributeValues - int8_t ..... Passed 0.01 sec 12/30 Test #12: NodePopulationmatchAttributeValues - uint8_t .... Passed 0.00 sec Start 15: NodePopulationmatchAttributeValues - int32_t Start 16: NodePopulationmatchAttributeValues - uint32_t 13/30 Test #13: NodePopulationmatchAttributeValues - int16_t .... Passed 0.01 sec Start 17: NodePopulationmatchAttributeValues - int64_t 14/30 Test #14: NodePopulationmatchAttributeValues - uint16_t ... Passed 0.00 sec Start 18: NodePopulationmatchAttributeValues - uint64_t 15/30 Test #15: NodePopulationmatchAttributeValues - int32_t .... Passed 0.00 sec Start 19: NodeSetParse 16/30 Test #16: NodePopulationmatchAttributeValues - uint32_t ... Passed 0.00 sec Start 20: NodeSetBasic 17/30 Test #17: NodePopulationmatchAttributeValues - int64_t .... Passed 0.01 sec Start 21: NodeSetCompound 18/30 Test #18: NodePopulationmatchAttributeValues - uint64_t ... Passed 0.01 sec Start 22: NodeSet 19/30 Test #19: NodeSetParse .................................... Passed 0.01 sec Start 23: EdgePopulation 20/30 Test #22: NodeSet ......................................... Passed 0.00 sec Start 24: EdgePopulationSelectAll 21/30 Test #20: NodeSetBasic .................................... Passed 0.01 sec Start 25: EdgePopulation::writeIndices 22/30 Test #21: NodeSetCompound ................................. Passed 0.01 sec Start 26: EdgeStorage 23/30 Test #23: EdgePopulation .................................. Passed 0.01 sec 24/30 Test #24: EdgePopulationSelectAll ......................... Passed 0.00 sec Start 27: CircuitConfig Start 28: SimulationConfig 25/30 Test #25: EdgePopulation::writeIndices .................... Passed 0.01 sec Start 29: SONATA 26/30 Test #26: EdgeStorage ..................................... Passed 0.01 sec Start 30: unittests 27/30 Test #27: CircuitConfig ................................... Passed 0.01 sec 28/30 Test #29: SONATA .......................................... Passed 0.00 sec 29/30 Test #28: SimulationConfig ................................ Passed 0.01 sec 30/30 Test #30: unittests ....................................... Passed 0.02 sec 100% tests passed, 0 tests failed out of 30 Total Test time (real) = 0.06 sec + mkdir _empty + cp -rp python/tests _empty/ + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + PATH=/builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/lib64/python3.13/site-packages:/builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/lib/python3.13/site-packages + PYTHONDONTWRITEBYTECODE=1 + PYTEST_ADDOPTS=' --ignore=/builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/.pyproject-builddir' + PYTEST_XDIST_AUTO_NUM_WORKERS=4 + /usr/bin/pytest -v _empty/tests ============================= test session starts ============================== platform linux -- Python 3.13.1, pytest-8.3.4, pluggy-1.5.0 -- /usr/bin/python3 cachedir: .pytest_cache rootdir: /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29 configfile: pyproject.toml collecting ... collected 80 items _empty/tests/test_config.py::TestCircuitConfig::test_astrocyte_properties PASSED [ 1%] _empty/tests/test_config.py::TestCircuitConfig::test_basic PASSED [ 2%] _empty/tests/test_config.py::TestCircuitConfig::test_biophysical_properties_raises PASSED [ 3%] _empty/tests/test_config.py::TestCircuitConfig::test_duplicate_population PASSED [ 5%] _empty/tests/test_config.py::TestCircuitConfig::test_endfeet_properties PASSED [ 6%] _empty/tests/test_config.py::TestCircuitConfig::test_expanded_json PASSED [ 7%] _empty/tests/test_config.py::TestCircuitConfig::test_get_population_properties PASSED [ 8%] _empty/tests/test_config.py::TestCircuitConfig::test_partial PASSED [ 10%] _empty/tests/test_config.py::TestCircuitConfig::test_shadowing_morphs PASSED [ 11%] _empty/tests/test_config.py::TestCircuitConfig::test_spatial_directories PASSED [ 12%] _empty/tests/test_config.py::TestCircuitConfig::test_vasculature_properties PASSED [ 13%] _empty/tests/test_config.py::TestSimulationConfig::test_basic PASSED [ 15%] _empty/tests/test_config.py::TestSimulationConfig::test_empty_conditions PASSED [ 16%] _empty/tests/test_config.py::TestSimulationConfig::test_empty_connection_overrides PASSED [ 17%] _empty/tests/test_config.py::TestSimulationConfig::test_expanded_json PASSED [ 18%] _empty/tests/test_config.py::TestSimulationConfig::test_run PASSED [ 20%] _empty/tests/test_config.py::TestSimulationConfig::test_simulation_config_failures PASSED [ 21%] _empty/tests/test_nodesets.py::TestNodeSetFailure::test_BasicScalarFailFloat PASSED [ 22%] _empty/tests/test_nodesets.py::TestNodeSetFailure::test_BasicScalarFailNegativeNodeIds PASSED [ 23%] _empty/tests/test_nodesets.py::TestNodeSetFailure::test_BasicScalarFailPopulation PASSED [ 25%] _empty/tests/test_nodesets.py::TestNodeSetFailure::test_CorrectStructure PASSED [ 26%] _empty/tests/test_nodesets.py::TestNodeSetFailure::test_FailCompoundWithInt PASSED [ 27%] _empty/tests/test_nodesets.py::TestNodeSetFailure::test_FaileRecursiveCompound PASSED [ 28%] _empty/tests/test_nodesets.py::TestNodeSetFailure::test_MissingBasic PASSED [ 30%] _empty/tests/test_nodesets.py::TestNodeSetFailure::test_MissingFile PASSED [ 31%] _empty/tests/test_nodesets.py::TestNodePopulationNodeSet::test_BasicScalarAnded PASSED [ 32%] _empty/tests/test_nodesets.py::TestNodePopulationNodeSet::test_BasicScalarEnum PASSED [ 33%] _empty/tests/test_nodesets.py::TestNodePopulationNodeSet::test_BasicScalarInt PASSED [ 35%] _empty/tests/test_nodesets.py::TestNodePopulationNodeSet::test_BasicScalarNodeId PASSED [ 36%] _empty/tests/test_nodesets.py::TestNodePopulationNodeSet::test_BasicScalarPopulation PASSED [ 37%] _empty/tests/test_nodesets.py::TestNodePopulationNodeSet::test_BasicScalarString PASSED [ 38%] _empty/tests/test_nodesets.py::TestNodePopulationNodeSet::test_NodeSetCompound PASSED [ 40%] _empty/tests/test_nodesets.py::TestNodePopulationNodeSet::test_NodeSetEmptyArray PASSED [ 41%] _empty/tests/test_nodesets.py::TestNodePopulationNodeSet::test_NodeSet_toJSON PASSED [ 42%] _empty/tests/test_nodesets.py::TestNodePopulationNodeSet::test_extend PASSED [ 43%] _empty/tests/test_nodesets.py::TestNodePopulationNodeSet::test_library_datatype PASSED [ 45%] _empty/tests/test_population.py::TestSelection::test_basic PASSED [ 46%] _empty/tests/test_population.py::TestSelection::test_comparison PASSED [ 47%] _empty/tests/test_population.py::TestSelection::test_dtypes PASSED [ 48%] _empty/tests/test_population.py::TestSelection::test_from_ranges PASSED [ 50%] _empty/tests/test_population.py::TestSelection::test_from_values PASSED [ 51%] _empty/tests/test_population.py::TestSelection::test_from_values_empty PASSED [ 52%] _empty/tests/test_population.py::TestSelection::test_union_intersection PASSED [ 53%] _empty/tests/test_population.py::TestNodePopulation::test_attribute_names PASSED [ 55%] _empty/tests/test_population.py::TestNodePopulation::test_enumeration_names PASSED [ 56%] _empty/tests/test_population.py::TestNodePopulation::test_enumeration_values PASSED [ 57%] _empty/tests/test_population.py::TestNodePopulation::test_get_attribute PASSED [ 58%] _empty/tests/test_population.py::TestNodePopulation::test_get_dynamics_attribute PASSED [ 60%] _empty/tests/test_population.py::TestNodePopulation::test_match_values PASSED [ 61%] _empty/tests/test_population.py::TestNodePopulation::test_name PASSED [ 62%] _empty/tests/test_population.py::TestNodePopulation::test_select_all PASSED [ 63%] _empty/tests/test_population.py::TestNodePopulation::test_size PASSED [ 65%] _empty/tests/test_population.py::TestEdgePopulation::test_afferent_edges PASSED [ 66%] _empty/tests/test_population.py::TestEdgePopulation::test_connecting_edges PASSED [ 67%] _empty/tests/test_population.py::TestEdgePopulation::test_efferent_edges PASSED [ 68%] _empty/tests/test_population.py::TestEdgePopulation::test_library_enumeration PASSED [ 70%] _empty/tests/test_population.py::TestEdgePopulation::test_select_all PASSED [ 71%] _empty/tests/test_population.py::TestEdgePopulation::test_source PASSED [ 72%] _empty/tests/test_population.py::TestEdgePopulation::test_source_nodes PASSED [ 73%] _empty/tests/test_population.py::TestEdgePopulation::test_target PASSED [ 75%] _empty/tests/test_population.py::TestEdgePopulation::test_target_nodes PASSED [ 76%] _empty/tests/test_population.py::TestMisc::test_path_ctor PASSED [ 77%] _empty/tests/test_reports.py::TestSpikeReader::test_getTimes_from_population PASSED [ 78%] _empty/tests/test_reports.py::TestSpikeReader::test_get_all_populations PASSED [ 80%] _empty/tests/test_reports.py::TestSpikeReader::test_get_inexistant_population PASSED [ 81%] _empty/tests/test_reports.py::TestSpikeReader::test_get_population PASSED [ 82%] _empty/tests/test_reports.py::TestSpikeReader::test_get_spikes_from_population PASSED [ 83%] _empty/tests/test_reports.py::TestSomaReportReader::test_block_gap_limit PASSED [ 85%] _empty/tests/test_reports.py::TestSomaReportReader::test_get_all_population PASSED [ 86%] _empty/tests/test_reports.py::TestSomaReportReader::test_get_inexistant_population PASSED [ 87%] _empty/tests/test_reports.py::TestSomaReportReader::test_get_node_id_element_id_mapping PASSED [ 88%] _empty/tests/test_reports.py::TestSomaReportReader::test_get_population PASSED [ 90%] _empty/tests/test_reports.py::TestSomaReportReader::test_get_reports_from_population PASSED [ 91%] _empty/tests/test_reports.py::TestElementReportReader::test_block_gap_limit PASSED [ 92%] _empty/tests/test_reports.py::TestElementReportReader::test_get_all_population PASSED [ 93%] _empty/tests/test_reports.py::TestElementReportReader::test_get_inexistant_population PASSED [ 95%] _empty/tests/test_reports.py::TestElementReportReader::test_get_node_id_element_id_mapping PASSED [ 96%] _empty/tests/test_reports.py::TestElementReportReader::test_get_node_ids PASSED [ 97%] _empty/tests/test_reports.py::TestElementReportReader::test_get_population PASSED [ 98%] _empty/tests/test_reports.py::TestElementReportReader::test_get_reports_from_population PASSED [100%] ============================== 80 passed in 0.17s ============================== + RPM_EC=0 ++ jobs -p + exit 0 Processing files: libsonata-0.1.29-1.fc42.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.nb633b + umask 022 + cd /builddir/build/BUILD/libsonata-0.1.29-build + cd libsonata-0.1.29 + DOCDIR=/builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/share/doc/libsonata + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/share/doc/libsonata + cp -pr /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/README.rst /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/share/doc/libsonata + cp -pr /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/CHANGELOG.md /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/share/doc/libsonata + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.YHGapL + umask 022 + cd /builddir/build/BUILD/libsonata-0.1.29-build + cd libsonata-0.1.29 + LICENSEDIR=/builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/share/licenses/libsonata + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/share/licenses/libsonata + cp -pr /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/COPYING.LESSER /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/share/licenses/libsonata + RPM_EC=0 ++ jobs -p + exit 0 Provides: libsonata = 0.1.29-1.fc42 libsonata(x86-64) = 0.1.29-1.fc42 libsonata.so.0.1()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libhdf5.so.310()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.15)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Processing files: libsonata-devel-0.1.29-1.fc42.x86_64 Provides: libsonata-devel = 0.1.29-1.fc42 libsonata-devel(x86-64) = 0.1.29-1.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libsonata.so.0.1()(64bit) Processing files: python3-libsonata-0.1.29-1.fc42.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.Swlcny + umask 022 + cd /builddir/build/BUILD/libsonata-0.1.29-build + cd libsonata-0.1.29 + DOCDIR=/builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/share/doc/python3-libsonata + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/share/doc/python3-libsonata + cp -pr /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/README.rst /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/share/doc/python3-libsonata + cp -pr /builddir/build/BUILD/libsonata-0.1.29-build/libsonata-0.1.29/CHANGELOG.md /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT/usr/share/doc/python3-libsonata + RPM_EC=0 ++ jobs -p + exit 0 Provides: python-libsonata = 0.1.29-1.fc42 python3-libsonata = 0.1.29-1.fc42 python3-libsonata(x86-64) = 0.1.29-1.fc42 python3.13-libsonata = 0.1.29-1.fc42 python3.13dist(libsonata) = 0.1.29 python3dist(libsonata) = 0.1.29 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libhdf5.so.310()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.11)(64bit) libstdc++.so.6(CXXABI_1.3.13)(64bit) libstdc++.so.6(CXXABI_1.3.15)(64bit) libstdc++.so.6(CXXABI_1.3.2)(64bit) libstdc++.so.6(CXXABI_1.3.3)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) python(abi) = 3.13 python3.13dist(numpy) >= 1.17.3 rtld(GNU_HASH) Processing files: libsonata-debugsource-0.1.29-1.fc42.x86_64 Provides: libsonata-debugsource = 0.1.29-1.fc42 libsonata-debugsource(x86-64) = 0.1.29-1.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: libsonata-debuginfo-0.1.29-1.fc42.x86_64 Provides: debuginfo(build-id) = 9e4dfa521dd06152af5beb4b8a322a03ec0a7c33 libsonata-debuginfo = 0.1.29-1.fc42 libsonata-debuginfo(x86-64) = 0.1.29-1.fc42 libsonata.so.0.1.29-0.1.29-1.fc42.x86_64.debug()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: libsonata-debugsource(x86-64) = 0.1.29-1.fc42 Processing files: python3-libsonata-debuginfo-0.1.29-1.fc42.x86_64 Provides: debuginfo(build-id) = 41b854d6919d0a5587f2b4ec3c144fbff92c58b2 python-libsonata-debuginfo = 0.1.29-1.fc42 python3-libsonata-debuginfo = 0.1.29-1.fc42 python3-libsonata-debuginfo(x86-64) = 0.1.29-1.fc42 python3.13-libsonata-debuginfo = 0.1.29-1.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: libsonata-debugsource(x86-64) = 0.1.29-1.fc42 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/libsonata-0.1.29-build/BUILDROOT Wrote: /builddir/build/SRPMS/libsonata-0.1.29-1.fc42.src.rpm Wrote: /builddir/build/RPMS/libsonata-0.1.29-1.fc42.x86_64.rpm Wrote: /builddir/build/RPMS/python3-libsonata-0.1.29-1.fc42.x86_64.rpm Wrote: /builddir/build/RPMS/libsonata-debugsource-0.1.29-1.fc42.x86_64.rpm Wrote: /builddir/build/RPMS/libsonata-devel-0.1.29-1.fc42.x86_64.rpm Wrote: /builddir/build/RPMS/libsonata-debuginfo-0.1.29-1.fc42.x86_64.rpm Wrote: /builddir/build/RPMS/python3-libsonata-debuginfo-0.1.29-1.fc42.x86_64.rpm Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.lIS9lf + umask 022 + cd /builddir/build/BUILD/libsonata-0.1.29-build + test -d /builddir/build/BUILD/libsonata-0.1.29-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/libsonata-0.1.29-build + rm -rf /builddir/build/BUILD/libsonata-0.1.29-build + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild libsonata-0.1.29-1.fc42.src.rpm Finish: build phase for libsonata-0.1.29-1.fc42.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-42-x86_64-1738675788.601316/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names INFO: Done(/var/lib/copr-rpmbuild/results/libsonata-0.1.29-1.fc42.src.rpm) Config(child) 3 minutes 49 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "libsonata-debugsource", "epoch": null, "version": "0.1.29", "release": "1.fc42", "arch": "x86_64" }, { "name": "libsonata-devel", "epoch": null, "version": "0.1.29", "release": "1.fc42", "arch": "x86_64" }, { "name": "libsonata-debuginfo", "epoch": null, "version": "0.1.29", "release": "1.fc42", "arch": "x86_64" }, { "name": "python3-libsonata", "epoch": null, "version": "0.1.29", "release": "1.fc42", "arch": "x86_64" }, { "name": "libsonata", "epoch": null, "version": "0.1.29", "release": "1.fc42", "arch": "src" }, { "name": "python3-libsonata-debuginfo", "epoch": null, "version": "0.1.29", "release": "1.fc42", "arch": "x86_64" }, { "name": "libsonata", "epoch": null, "version": "0.1.29", "release": "1.fc42", "arch": "x86_64" } ] } RPMResults finished