# filelist

dirname: /usr/src/debug/openms-2.2.0-4.fc28.i386/py2build/src/openms/include/OpenMS/ANALYSIS/RNPXL
filetypes: ffffff
filenames:
  HyperScore.h/ModifiedPeptideGenerator.h/PScore.h/RNPxlMarkerIonExtractor.h/RNPxlModificationsGenerator.h/RNPxlReport.h


filenames: QApplicationTOPP.h
filetypes: f
dirname:
  /usr/src/debug/openms-2.2.0-4.fc28.i386/py2build/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/MISC


dirname: /usr/src/debug/openms-2.2.0-4.fc28.i386/py2build/src/openms/source/MATH/MISC
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dirname: /usr/src/debug/openms-2.2.0-4.fc28.i386/py2build/src/openms/include/OpenMS/KERNEL
filetypes: fffffffffffffffffffffffffffff
filenames:
  AreaIterator.h/BaseFeature.h/ChromatogramPeak.h/ChromatogramTools.h/ComparatorUtils.h/ConsensusFeature.h/ConsensusMap.h/ConversionHelper.h/DPeak.h/DRichPeak.h/Feature.h/FeatureHandle.h/FeatureMap.h/MRMFeature.h/MRMTransitionGroup.h/MSChromatogram.h/MSExperiment.h/MSSpectrum.h/MassTrace.h/OnDiscMSExperiment.h/Peak1D.h/Peak2D.h/PeakIndex.h/RangeManager.h/RangeUtils.h/RichPeak1D.h/RichPeak2D.h/StandardDeclarations.h/StandardTypes.h


dirname: /usr/src/debug/openms-2.2.0-4.fc28.i386/py2build/src/openms/source/FILTERING/DATAREDUCTION
filetypes: fffffff
filenames:
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filetypes: ffffffffffffffffffffffffffffffffffffffffffffff
dirname:
  /usr/src/debug/openms-2.2.0-4.fc28.i386/py2build/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER

filenames:
  BaseModel.h/BaseModel_impl.h/BiGaussFitter1D.h/BiGaussModel.h/EGHTraceFitter.h/ElutionModelFitter.h/EmgFitter1D.h/EmgModel.h/EmgScoring.h/ExtendedIsotopeFitter1D.h/ExtendedIsotopeModel.h/FeaFiModule.h/FeatureFinder.h/FeatureFinderAlgorithm.h/FeatureFinderAlgorithmIsotopeWavelet.h/FeatureFinderAlgorithmMRM.h/FeatureFinderAlgorithmPicked.h/FeatureFinderAlgorithmPickedHelperStructs.h/FeatureFinderDefs.h/Fitter1D.h/GaussFitter1D.h/GaussModel.h/GaussTraceFitter.h/InterpolationModel.h/IsotopeFitter1D.h/IsotopeModel.h/IsotopeWavelet.h/IsotopeWaveletConstants.h/IsotopeWaveletTransform.h/LevMarqFitter1D.h/MaxLikeliFitter1D.h/ModelDescription.h/MultiplexClustering.h/MultiplexDeltaMasses.h/MultiplexDeltaMassesGenerator.h/MultiplexFilterResult.h/MultiplexFilterResultPeak.h/MultiplexFilterResultRaw.h/MultiplexFiltering.h/MultiplexFilteringCentroided.h/MultiplexFilteringProfile.h/MultiplexIsotopicPeakPattern.h/PeakWidthEstimator.h/ProductModel.h/SeedListGenerator.h/TraceFitter.h


dirname: /usr/src/debug/openms-2.2.0-4.fc28.i386/py2build/src/openms/source/FILTERING/TRANSFORMERS
filetypes: ffffffffffffffffffffff
filenames:
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dirname: /usr/src/debug/openms-2.2.0-4.fc28.i386/py2build/src/utils
filetypes: fffffffffffffffffffffffffffffffffffffffffffffffffffffffffff
filenames:
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dirname: /usr/src/debug/openms-2.2.0-4.fc28.i386/py2build/src/openms/source/ANALYSIS/OPENSWATH
filetypes: fffdfffffffffffffffffffff
filenames:
  ChromatogramExtractor.cpp/ChromatogramExtractorAlgorithm.cpp/ConfidenceScoring.cpp/DATAACCESS/DIAHelper.cpp/DIAPrescoring.cpp/DIAScoring.cpp/MRMAssay.cpp/MRMDecoy.cpp/MRMFeatureFinderScoring.cpp/MRMIonSeries.cpp/MRMRTNormalizer.cpp/MRMTransitionGroupPicker.cpp/OpenSwathHelper.cpp/OpenSwathOSWWriter.cpp/OpenSwathScoring.cpp/OpenSwathTSVWriter.cpp/OpenSwathWorkflow.cpp/PeakPickerMRM.cpp/SONARScoring.cpp/SpectrumAddition.cpp/SwathMapMassCorrection.cpp/SwathWindowLoader.cpp/TransitionPQPReader.cpp/TransitionTSVReader.cpp


dirname: /usr/src/debug/openms-2.2.0-4.fc28.i386/py2build/build/src/openms_gui/include/OpenMS/VISUAL/DIALOGS
filetypes: dfffffffffffffffffffff
filenames:
  UIC/moc_DataFilterDialog.cxx/moc_FeatureEditDialog.cxx/moc_HistogramDialog.cxx/moc_LayerStatisticsDialog.cxx/moc_SaveImageDialog.cxx/moc_Spectrum1DGoToDialog.cxx/moc_Spectrum1DPrefDialog.cxx/moc_Spectrum2DGoToDialog.cxx/moc_Spectrum2DPrefDialog.cxx/moc_Spectrum3DPrefDialog.cxx/moc_SpectrumAlignmentDialog.cxx/moc_TOPPASIOMappingDialog.cxx/moc_TOPPASInputFileDialog.cxx/moc_TOPPASInputFilesDialog.cxx/moc_TOPPASOutputFilesDialog.cxx/moc_TOPPASToolConfigDialog.cxx/moc_TOPPASVertexNameDialog.cxx/moc_TOPPViewOpenDialog.cxx/moc_TOPPViewPrefDialog.cxx/moc_TheoreticalSpectrumGenerationDialog.cxx/moc_ToolsDialog.cxx


dirname: /usr/src/debug/openms-2.2.0-4.fc28.i386/py2build/src/openms_gui/include/OpenMS/VISUAL/DIALOGS
filetypes: fffffffffffffffffffff
filenames:
  DataFilterDialog.h/FeatureEditDialog.h/HistogramDialog.h/LayerStatisticsDialog.h/SaveImageDialog.h/Spectrum1DGoToDialog.h/Spectrum1DPrefDialog.h/Spectrum2DGoToDialog.h/Spectrum2DPrefDialog.h/Spectrum3DPrefDialog.h/SpectrumAlignmentDialog.h/TOPPASIOMappingDialog.h/TOPPASInputFileDialog.h/TOPPASInputFilesDialog.h/TOPPASOutputFilesDialog.h/TOPPASToolConfigDialog.h/TOPPASVertexNameDialog.h/TOPPViewOpenDialog.h/TOPPViewPrefDialog.h/TheoreticalSpectrumGenerationDialog.h/ToolsDialog.h


dirname: /usr/include/OpenMS/KERNEL
filetypes: fffffffffffffffffffffffffffff
filenames:
  AreaIterator.h/BaseFeature.h/ChromatogramPeak.h/ChromatogramTools.h/ComparatorUtils.h/ConsensusFeature.h/ConsensusMap.h/ConversionHelper.h/DPeak.h/DRichPeak.h/Feature.h/FeatureHandle.h/FeatureMap.h/MRMFeature.h/MRMTransitionGroup.h/MSChromatogram.h/MSExperiment.h/MSSpectrum.h/MassTrace.h/OnDiscMSExperiment.h/Peak1D.h/Peak2D.h/PeakIndex.h/RangeManager.h/RangeUtils.h/RichPeak1D.h/RichPeak2D.h/SpectrumHelper.h/StandardTypes.h


dirname: /usr/include/OpenMS/ANALYSIS/OPENSWATH/OPENSWATHALGO/DATAACCESS
filetypes: fffffffff
filenames:
  DataFrameWriter.h/DataStructures.h/ISpectrumAccess.h/ITransition.h/MockObjects.h/SpectrumHelpers.h/TransitionExperiment.h/TransitionHelper.h/Transitions.h


dirname: /usr/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS
filetypes: fffffff
filenames:
  DataAccessHelper.h/MRMFeatureAccessOpenMS.h/SimpleOpenMSSpectraAccessFactory.h/SpectrumAccessOpenMS.h/SpectrumAccessOpenMSCached.h/SpectrumAccessOpenMSInMemory.h/SpectrumAccessQuadMZTransforming.h


dirname: /usr/include/OpenMS/VISUAL
filetypes: ddffffdfffffffdffffffffffffffffffffffffffffffd
filenames:
  ANNOTATION/APPLICATIONS/AxisPainter.h/AxisTickCalculator.h/AxisWidget.h/ColorSelector.h/DIALOGS/EnhancedTabBar.h/EnhancedTabBarWidgetInterface.h/EnhancedWorkspace.h/GUIProgressLoggerImpl.h/HistogramWidget.h/LayerData.h/ListEditor.h/MISC/MetaDataBrowser.h/MultiGradient.h/MultiGradientSelector.h/OpenMS_GUIConfig.h/ParamEditor.h/SpectraIdentificationViewWidget.h/SpectraViewWidget.h/Spectrum1DCanvas.h/Spectrum1DWidget.h/Spectrum2DCanvas.h/Spectrum2DWidget.h/Spectrum3DCanvas.h/Spectrum3DOpenGLCanvas.h/Spectrum3DWidget.h/SpectrumCanvas.h/SpectrumWidget.h/TOPPASEdge.h/TOPPASInputFileListVertex.h/TOPPASMergerVertex.h/TOPPASOutputFileListVertex.h/TOPPASResource.h/TOPPASResources.h/TOPPASScene.h/TOPPASTabBar.h/TOPPASToolVertex.h/TOPPASTreeView.h/TOPPASVertex.h/TOPPASWidget.h/TOPPViewIdentificationViewBehavior.h/TOPPViewSpectraViewBehavior.h/VISUALIZER


dirname: /usr/include/OpenMS/ANALYSIS/OPENSWATH
filetypes: fffdfffffffffdffffffffffff
filenames:
  ChromatogramExtractor.h/ChromatogramExtractorAlgorithm.h/ConfidenceScoring.h/DATAACCESS/DIAHelper.h/DIAPrescoring.h/DIAScoring.h/MRMAssay.h/MRMDecoy.h/MRMFeatureFinderScoring.h/MRMIonSeries.h/MRMRTNormalizer.h/MRMTransitionGroupPicker.h/OPENSWATHALGO/OpenSwathHelper.h/OpenSwathOSWWriter.h/OpenSwathScoring.h/OpenSwathTSVWriter.h/OpenSwathWorkflow.h/PeakPickerMRM.h/SONARScoring.h/SpectrumAddition.h/SwathMapMassCorrection.h/SwathWindowLoader.h/TransitionPQPReader.h/TransitionTSVReader.h


dirname: /usr/include/OpenMS/FORMAT/DATAACCESS
filetypes: fffffffff
filenames:
  MSDataAggregatingConsumer.h/MSDataCachedConsumer.h/MSDataChainingConsumer.h/MSDataSqlConsumer.h/MSDataStoringConsumer.h/MSDataTransformingConsumer.h/MSDataWritingConsumer.h/NoopMSDataConsumer.h/SwathFileConsumer.h


dirname: /usr/include/OpenMS/CONCEPT
filetypes: fffffffffffffffffffffff
filenames:
  BinaryComposeFunctionAdapter.h/ClassTest.h/Constants.h/Exception.h/Factory.h/FactoryBase.h/FuzzyStringComparator.h/GlobalExceptionHandler.h/Helpers.h/LogConfigHandler.h/LogStream.h/Macros.h/PrecisionWrapper.h/ProgressLogger.h/SingletonRegistry.h/StreamHandler.h/TypeAsString.h/Types.h/UnaryComposeFunctionAdapter.h/UniqueIdGenerator.h/UniqueIdIndexer.h/UniqueIdInterface.h/VersionInfo.h


dirname: /usr/include/OpenMS/DATASTRUCTURES
filetypes: ffffffffffffffffffffffffffffffffffffffd
filenames:
  Adduct.h/BigString.h/BinaryTreeNode.h/CVMappingRule.h/CVMappingTerm.h/CVMappings.h/CVReference.h/CalibrationData.h/ChargePair.h/Compomer.h/ConstRefVector.h/ConvexHull2D.h/DBoundingBox.h/DIntervalBase.h/DPosition.h/DRange.h/DataValue.h/Date.h/DateTime.h/DefaultParamHandler.h/DistanceMatrix.h/GridFeature.h/IsotopeCluster.h/KDTree.h/LPWrapper.h/ListUtils.h/ListUtilsIO.h/Map.h/MassExplainer.h/Matrix.h/Param.h/QTCluster.h/SeqanIncludeWrapper.h/SparseVector.h/String.h/StringListUtils.h/StringUtils.h/ToolDescription.h/Utils


dirname: /usr/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER
filetypes: ffffffffffffffffffffffffffffffffffffffffffffffdff
filenames:
  BaseModel.h/BaseModel_impl.h/BiGaussFitter1D.h/BiGaussModel.h/EGHTraceFitter.h/ElutionModelFitter.h/EmgFitter1D.h/EmgModel.h/EmgScoring.h/ExtendedIsotopeFitter1D.h/ExtendedIsotopeModel.h/FeaFiModule.h/FeatureFinder.h/FeatureFinderAlgorithm.h/FeatureFinderAlgorithmIsotopeWavelet.h/FeatureFinderAlgorithmMRM.h/FeatureFinderAlgorithmPicked.h/FeatureFinderAlgorithmPickedHelperStructs.h/FeatureFinderAlgorithmSH.h/FeatureFinderAlgorithmSHCtrl.h/FeatureFinderDefs.h/Fitter1D.h/GaussFitter1D.h/GaussModel.h/GaussTraceFitter.h/InterpolationModel.h/IsotopeFitter1D.h/IsotopeModel.h/IsotopeWavelet.h/IsotopeWaveletConstants.h/IsotopeWaveletTransform.h/LevMarqFitter1D.h/MaxLikeliFitter1D.h/ModelDescription.h/MultiplexClustering.h/MultiplexDeltaMasses.h/MultiplexDeltaMassesGenerator.h/MultiplexFilterResult.h/MultiplexFilterResultPeak.h/MultiplexFilterResultRaw.h/MultiplexFiltering.h/MultiplexFilteringCentroided.h/MultiplexFilteringProfile.h/MultiplexIsotopicPeakPattern.h/PeakWidthEstimator.h/ProductModel.h/SUPERHIRN/SeedListGenerator.h/TraceFitter.h


dirname: /usr/include/OpenMS/MATH/STATISTICS
filetypes: fffffffffffff
filenames:
  AsymmetricStatistics.h/AveragePosition.h/BasicStatistics.h/GammaDistributionFitter.h/GaussFitter.h/GumbelDistributionFitter.h/Histogram.h/LinearRegression.h/PosteriorErrorProbabilityModel.h/QuadraticRegression.h/ROCCurve.h/RegressionUtils.h/StatisticFunctions.h


dirname: /usr/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN
filetypes: fffffffffffffffffffffffff
filenames:
  BackgroundControl.h/BackgroundIntensityBin.h/CentroidData.h/CentroidPeak.h/ClusteredMS2ConsensusSpectrum.h/ConsensusIsotopePattern.h/Deisotoper.h/FTPeakDetectController.h/FeatureLCProfile.h/IsotopicDist.h/LCElutionPeak.h/LCMS.h/LCMSCData.h/MS1FeatureMerger.h/MS2ConsensusSpectrum.h/MS2Feature.h/MS2Fragment.h/MS2Info.h/MSPeak.h/ProcessData.h/RawData.h/SHFeature.h/SuperHirnConfig.h/SuperHirnParameters.h/SuperHirnUtil.h


dirname: /usr/include/OpenMS
filetypes: ddddddddddddfddddfff
filenames:
  ANALYSIS/APPLICATIONS/CHEMISTRY/COMPARISON/CONCEPT/DATASTRUCTURES/FILTERING/FORMAT/INTERFACES/KERNEL/MATH/METADATA/OpenMSConfig.h/SIMULATION/SYSTEM/TRANSFORMATIONS/VISUAL/config.h/openms_data_path.h/openms_package_version.h


dirname: /usr/share/doc/openms-doc/html
filenames:
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