dataK {survivalPLANN}R Documentation

Observed Mortality Data of Patients with Cancer

Description

An data frame with a simulated sample of patients with a cancer and their follow-up.

Usage

data(dataK)

Format

The format is "data.frame". The names of the columns are:

sex A numeric vector equals 1 for male and 2 for male.
age A numeric vector with the age of the patient at the time of cancer diagnosis (baseline).
year A numeric vector with the date of diagnosis (in date format, i.e.,
the number of days since 1Jan60).
stade A numeric vector with the disease stage: 1 for advanced cancer and 0 otherwise.
according to the time. Only the dimension related to sex equals 1.
delay A numeric vector indicating early diagnosis: 1 for delayed diagnosis and 0 otherwise.
biomarker A numeric vector with a biomarker associated with cancer-specific mortality.
sexchara A character vector with the patient gender: "male" or "female".
event A numeric vector equals 1 for death and 0 for censoring.
time A numeric vector with the follow-up time in days since the cancer diagnostic.

Details

The data frame was obtained by simulations. The French mortality tables were used for the expected mortality and a proportional hazard model with an Exponential distribution for the baseline hazard.

Examples

data(dataK)

# Plotting the observed survival by using the Kaplan-Meier estimator

plot(survfit(Surv(time/365.241, event) ~ 1, data = dataK),
     ylab="Patient survival", xlab="Post-diagnostic time in years")

[Package survivalPLANN version 0.4 Index]