plotIncidence {IncidencePrevalence} | R Documentation |
Plot incidence results
Description
Plot incidence results
Usage
plotIncidence(
result,
x = "incidence_start_date",
y = "incidence_100000_pys",
line = FALSE,
point = TRUE,
ribbon = FALSE,
ymin = "incidence_100000_pys_95CI_lower",
ymax = "incidence_100000_pys_95CI_upper",
facet = NULL,
colour = NULL
)
Arguments
result |
Incidence results |
x |
Variable to plot on x axis |
y |
Variable to plot on y axis. |
line |
Whether to plot a line using |
point |
Whether to plot points using |
ribbon |
Whether to plot a ribbon using |
ymin |
Lower limit of error bars, if provided is plot using |
ymax |
Upper limit of error bars, if provided is plot using |
facet |
Variables to use for facets. To see available variables for
facetting use the function |
colour |
Variables to use for colours. To see available variables for
colouring use the function |
Value
A ggplot with the incidence results plotted
Examples
cdm <- mockIncidencePrevalence(sampleSize = 1000)
cdm <- generateDenominatorCohortSet(
cdm = cdm, name = "denominator",
cohortDateRange = c(as.Date("2008-01-01"), as.Date("2018-01-01"))
)
inc <- estimateIncidence(
cdm = cdm,
denominatorTable = "denominator",
outcomeTable = "outcome"
)
plotIncidence(inc)
[Package IncidencePrevalence version 1.2.1 Index]