prepare_gene_sets {ggpicrust2} | R Documentation |
Prepare gene sets for GSEA
Description
Prepare gene sets for GSEA
Usage
prepare_gene_sets(pathway_type = "KEGG", organism = "ko")
Arguments
pathway_type |
A character string specifying the pathway type: "KEGG", "MetaCyc", or "GO" |
organism |
A character string specifying the organism (only relevant for KEGG and GO) |
Value
A list of pathway gene sets
[Package ggpicrust2 version 2.3.2 Index]