soilphys_layered {ConFluxPro} | R Documentation |
soilphys_layered
Description
This function calculates (harmonic-) means of the soilphys dataframe per layer for the flux calculation.
Usage
soilphys_layered(soilphys, layers_map, param, funs, id_cols)
Arguments
soilphys |
(dataframe) the soilphys dataframe |
layers_map |
(dataframe) containing the following parameters:
|
param |
(character vector) A vector containing the names of the variables in soilphys to be carried over |
funs |
(character vector) A vector defining the type of mean to be used. One of "arith" or "harm" |
id_cols |
(character vector) A list of all columns, that, together, uniquely identify one profile. |
Value
soilphys, reduced to any id_cols
and param
columns and
summarised to the layers provided in layers_map
See Also
Other soilphys:
check_soilphys()
,
complete_soilphys()
,
discretize_depth()
Examples
data(soildiff)
layers_map <- data.frame(site = rep(c("site_a",
"site_b"),each = 2),
upper = c(5,0,7,0),
lower = c(0,-100,0,-100),
layer = rep(c("HU","M1"),times = 2)
)
soildiff$depth <- (soildiff$upper + soildiff$lower) / 2
soilphys_layered(soilphys = soildiff,
layers_map = layers_map,
param = c("TPS","a"),
funs = c("harm","arith"),
id_cols = c("site"))
[Package ConFluxPro version 1.3.1 Index]