node_boxplot {multiDEGGs}R Documentation

Boxplots of single nodes (genes,proteins, etc.)

Description

This function is for internal use of View_diffnetworks

Usage

node_boxplot(gene, assayDataName = 1, deggs_object)

Arguments

gene

gene name (must be in rownames(assayData))

assayDataName

name of the assayData of interest. If an unnamed list of data was given to get_diffNetworks, the assayDataName here will be the number indicating the position of the data in the assayDataList provided before (i.e. if the user wants to plot a differential interaction observed in the transcriptomic data, which was second in the list, then assayDataName must be 2, if only one data table was provided assayDataName must be 1). Default 1.

deggs_object

an object of class deggs generated by get_diffNetworks

Value

the boxplot


[Package multiDEGGs version 1.0.0 Index]