DAISIE_plot_immigration {DAISIE} | R Documentation |
Plot immigration rate through time
Description
Plot immigration rate through time
Usage
DAISIE_plot_immigration(
total_time,
K,
area_pars,
gam,
peak,
mainland_n,
hyper_pars = NULL,
island_ontogeny = "beta",
sea_level = "const",
removed_timepoints,
resolution
)
Arguments
total_time |
Numeric defining the length of the simulation in time units. |
K |
A numeric with carrying capacity. |
area_pars |
A named list containing area and sea level parameters as
created by
|
gam |
A numeric with the per capita immigration rate. |
peak |
A numeric value specifying the peakiness (or shaprness) of the
ontogeny curve. Higher values imply peakier ontogeny. This value is
internally calculated by |
mainland_n |
A numeric stating the number of mainland species, that is the number of species that can potentially colonize the island. If using a clade-specific diversity dependence, this value is set to 1. If using an island-wide diversity dependence, this value is set to the number of mainland species. |
hyper_pars |
A named list of numeric hyperparameters for the rate
calculations as returned by
|
island_ontogeny |
In |
sea_level |
In |
removed_timepoints |
Positive integer with number of first datapoints to be removed from rate plots (to prevent Inf) |
resolution |
numeric indicating resolution of plot. Should be < 0. |
Value
a plot with per capita immigration rate through time and dataframe with immigration at corresponding time
Author(s)
Pedro Neves