DAISIE_create_island {DAISIE} | R Documentation |
Converts simulation output into island output
Description
Converts simulation output into island output
Usage
DAISIE_create_island(
stt_table,
total_time,
island_spec,
mainland_n,
trait_pars = NULL
)
Arguments
stt_table |
Matrix with number of species at each time step. |
total_time |
Numeric defining the length of the simulation in time units. |
island_spec |
Matrix with current state of simulation containing number of species. |
mainland_n |
A numeric stating the number of mainland species, that is the number of species that can potentially colonize the island. If using a clade-specific diversity dependence, this value is set to 1. If using an island-wide diversity dependence, this value is set to the number of mainland species. |
trait_pars |
A named list containing diversification rates considering
two trait states created by
|
Value
list with the island information, composed stt table, branching times of extant species, status of species on the island and number of missing species.