DAISIE_plot_cladogenesis {DAISIE} | R Documentation |
Plot cladogenesis rate through time
Description
Plot cladogenesis rate through time
Usage
DAISIE_plot_cladogenesis(
total_time,
K,
area_pars,
peak,
lac,
island_ontogeny = "beta",
sea_level = "const",
hyper_pars = NULL,
removed_timepoints,
resolution
)
Arguments
total_time |
Numeric defining the length of the simulation in time units. |
K |
A numeric with carrying capacity. |
area_pars |
A named list containing area and sea level parameters as
created by
|
peak |
A numeric value specifying the peakiness (or shaprness) of the
ontogeny curve. Higher values imply peakier ontogeny. This value is
internally calculated by |
lac |
A numeric with the per capita cladogenesis rate. |
island_ontogeny |
In |
sea_level |
In |
hyper_pars |
A named list of numeric hyperparameters for the rate
calculations as returned by
|
removed_timepoints |
Positive integer with number of first datapoints to be removed from rate plots (to prevent Inf) |
resolution |
numeric indicating resolution of plot. Should be < 0. |
Value
a plot with per capita cladogenesis rate through time and dataframe with immigration at corresponding time
Author(s)
Pedro Neves