licoread {licoread} | R Documentation |
reads Li-COR files in a given location
Description
reads Li-COR files in a given location
Usage
licoread(
location,
file_type = "auto",
file_type_list = c("82z", "81x", "auto"),
data_file = "data.csv",
meta_file = "metadata.json",
regex_file = "(\\w*-)*\\w*(?=([.]82z$))",
sample = FALSE
)
Arguments
location |
location of the files |
file_type |
type of file (82z or 81x). If "auto" (default), the function will try to detect it by itself. |
file_type_list |
list of file types |
data_file |
name of the file with raw data |
meta_file |
name of the file with meta data |
regex_file |
regex expression matching the name of the 82z file. Here in case the user has a different than the default and for easier updates. |
sample |
|
Value
a tibble (nested or not depending on raw data) containing all the data from the raw files present at the location provided
Examples
path_82z <- system.file("extdata/82z", package = "licoread")
licoread(path_82z)
[Package licoread version 0.2.0 Index]