run_cutadapt {demulticoder}R Documentation

Core function for running 'Cutadapt'

Description

Core function for running 'Cutadapt'

Usage

run_cutadapt(
  cutadapt_path,
  cutadapt_data_barcode,
  barcode_params,
  minCutadaptlength
)

Arguments

cutadapt_path

A path to the 'Cutadapt' program.

minCutadaptlength

Read lengths that are lower than this threshold will be discarded. Default is 0.

Value

Trimmed read.


[Package demulticoder version 0.1.2 Index]