plot_post_trim_qc {demulticoder} | R Documentation |
Wrapper script for plotQualityProfile after trim steps and primer removal.
Description
Wrapper script for plotQualityProfile after trim steps and primer removal.
Usage
plot_post_trim_qc(
cutadapt_data,
output_directory_path,
n = 5e+05,
barcode_params
)
Arguments
cutadapt_data |
FASTQ read files trimmed of primers |
output_directory_path |
The path to the directory where resulting files are output |
n |
(Optional). Default 500,000. The number of records to sample from the fastq file. |
Value
Quality profiles of reads after primer trimming
[Package demulticoder version 0.1.2 Index]