get_read_counts {demulticoder} | R Documentation |
Final inventory of read counts after each step from input to removal of chimeras. This function deals with if you have more than one sample. TODO optimize for one sample
Description
Final inventory of read counts after each step from input to removal of chimeras. This function deals with if you have more than one sample. TODO optimize for one sample
Usage
get_read_counts(
asv_abund_matrix,
temp_directory_path,
output_directory_path,
metabarcode
)
Arguments
asv_abund_matrix |
The final abundance matrix containing amplified sequence variants |
[Package demulticoder version 0.1.2 Index]