make_cutadapt_tibble {demulticoder} | R Documentation |
Prepare for primmer trimming with 'Cutadapt'. Make new sub-directories and specify paths for the trimmed and untrimmed reads
Description
Prepare for primmer trimming with 'Cutadapt'. Make new sub-directories and specify paths for the trimmed and untrimmed reads
Usage
make_cutadapt_tibble(fastq_data, metadata_primer_data, temp_directory_path)
Arguments
fastq_data |
A |
metadata_primer_data |
A |
temp_directory_path |
User-defined temporary directory to output unfiltered, trimmed, and filtered read directories throughout the workflow |
Value
Returns a larger data.frame
containing paths to temporary read
directories, which is used as input when running 'Cutadapt'
[Package demulticoder version 0.1.2 Index]