get_post_trim_hits {demulticoder}R Documentation

Get primer counts for reach sample after primer removal and trimming steps

Description

Get primer counts for reach sample after primer removal and trimming steps

Usage

get_post_trim_hits(primer_data, cutadapt_data, output_directory_path)

Arguments

primer_data

Primer data.frame created using the orient_primers function to parse information on forward and reverse primer sequences.

cutadapt_data

FASTQ read files trimmed of primers

output_directory_path

The path to the directory where resulting files are output

Value

Table of read counts across each sample


[Package demulticoder version 0.1.2 Index]