format_abund_matrix {demulticoder}R Documentation

Format ASV abundance matrix

Description

Format ASV abundance matrix

Usage

format_abund_matrix(
  data_tables,
  asv_abund_matrix,
  seq_tax_asv,
  output_directory_path,
  metabarcode
)

Arguments

data_tables

The data tables containing the paths to read files, metadata, and metabarcode information with associated primer sequences

asv_abund_matrix

The final abundance matrix containing amplified sequence variants

seq_tax_asv

An amplified sequence variants matrix with taxonomic information


[Package demulticoder version 0.1.2 Index]