dist_prob_to_class {mappoly}R Documentation

Returns the class with the highest probability in a genotype probability distribution

Description

Returns the class with the highest probability in a genotype probability distribution

Usage

dist_prob_to_class(geno, prob.thres = 0.9)

Arguments

geno

the probabilistic genotypes contained in the object 'mappoly.data'

prob.thres

probability threshold to select the genotype. Values below this genotype are assumed as missing data

Value

a matrix containing the doses of each genotype and marker. Markers are disposed in rows and individuals are disposed in columns. Missing data are represented by NAs

Examples


geno.dose <- dist_prob_to_class(hexafake.geno.dist$geno)
geno.dose$geno.dose[1:10,1:10]
   

[Package mappoly version 0.4.1 Index]