get_indices_from_selected_phases {mappoly} | R Documentation |
Get the indices of selected linkage phases given a threshold
Description
Get the indices of selected linkage phases given a threshold
Usage
get_indices_from_selected_phases(x, thres)
Arguments
x |
a data frame containing information about two markers. In this data frame, the lines indicate the possible configuration phases and the columns indicate the LOD for configuration phase (ph_LOD), the recombination fraction (rf), and the LOD for recombination fraction (rf_LOD) |
thres |
a threshold from which the linkage phases can be discarded (if abs(ph_LOD) > thres) |
Value
a list of indices for both parents
[Package mappoly version 0.4.1 Index]