get_counts_single_parent {mappoly}R Documentation

Counts for recombinant classes in a polyploid parent.

Description

The conditional probability of a genotype at locus k+1 given the genotype at locus k is ...

Usage

get_counts_single_parent(
  ploidy,
  gen.par.mk1,
  gen.par.mk2,
  gen.prog.mk1,
  gen.prog.mk2
)

Arguments

ploidy

Ploidy level

gen.par.mk1

Genotype of marker mk1 (vector x \in 0, \cdots, m)

gen.par.mk2

Genotype of marker mk2 (vector x \in 0, \cdots, m)

gen.prog.mk1

Dose of marker mk1 on progeny

gen.prog.mk2

Dose of marker mk2 on progeny

Value

S3 object; a list consisting of

counts

counts for each one of the classes


[Package mappoly version 0.4.1 Index]