assign_shared_feature {SiFINeT} | R Documentation |
assign_shared_feature
Description
The function assigns non-unique candidate feature genes as shared feature genes into unique feature gene sets
Usage
assign_shared_feature(so, min_edge_prop = 0.4)
Arguments
so |
a SiFINeT object |
min_edge_prop |
minimum proportion of edges between a gene and a unique feature gene set for the new gene to be assigned to the set |
Details
Candidate feature genes that are not chosen as unique feature genes would be reconsidered as shared feature genes. A non-unique candidate feature gene would be assigned to a unique feature gene group if it is connected to more than min_edge_prop of the unique genes in the group.
Value
SiFINeT object with shared feature genes in featureset updated.
[Package SiFINeT version 1.13 Index]