getObservedResponse {DHARMa} | R Documentation |
Get model response
Description
Extract the response of a fitted model.
Usage
getObservedResponse(object, ...)
## Default S3 method:
getObservedResponse(object, ...)
## S3 method for class 'HLfit'
getObservedResponse(object, ...)
## S3 method for class 'phylolm'
getObservedResponse(object, ...)
## S3 method for class 'phyloglm'
getObservedResponse(object, ...)
Arguments
object |
a fitted model. |
... |
additional parameters. |
Details
The purpose of this function is to safely extract the observed response (dependent variable) of the fitted model classes.
Author(s)
Florian Hartig
See Also
getRefit, getSimulations, getFixedEffects, getFitted
Examples
testData = createData(sampleSize = 400, family = gaussian())
fittedModel <- lm(observedResponse ~ Environment1 , data = testData)
# response that was used to fit the model
getObservedResponse(fittedModel)
# predictions of the model for these points
getFitted(fittedModel)
# extract simulations from the model as matrix
getSimulations(fittedModel, nsim = 2)
# extract simulations from the model for refit (often requires different structure)
x = getSimulations(fittedModel, nsim = 2, type = "refit")
getRefit(fittedModel, x[[1]])
getRefit(fittedModel, getObservedResponse(fittedModel))
[Package DHARMa version 0.4.7 Index]