IMD_GLOBALS {immundata} | R Documentation |
Internal Immundata Global Configuration
Description
IMD_GLOBALS
is an internal list that stores globally used constants across the Immundata system.
It is not intended for direct use by package users, but rather to ensure consistency in schema
field names, default file names, and internal error messages.
Usage
IMD_GLOBALS
Format
An object of class list
of length 3.
Components
-
messages
: Named list of default messages and error texts (e.g.,"NotImpl"
). -
schema
: Standardized column names for internal schema usage. These include:-
barcode
: Column name for cell barcode IDs. -
receptor
: Column name for receptor unique identifiers. -
repertoire
: Column name for repertoire group IDs. -
metadata_filename
: Column name for metadata files (internal). -
count
: Column name for receptor count per group. -
filename
: Original column name used in user metadata.
-
-
files
: Default file names used to store structured Immundata:-
receptors
: File name for receptor-level data (receptors.parquet
). -
annotations
: File name for annotation-level data (annotations.parquet
).
-