labelIntNodes {MSCquartets} | R Documentation |
Label internal nodes on tree
Description
Label all internal nodes of tree, as "Node NN" where NN is the node number, and plot tree with labels
Usage
labelIntNodes(tree, plot = TRUE, type = "unrooted")
Arguments
tree |
a rooted or unrooted tree (phylo object) |
plot |
TRUE for plot, FALSE for no plot |
type |
plot type (e.g.,"unrooted") to be passed to ape plot command |
Value
a phylo object with internal node labels
See Also
resolveCycle
, combineCycleResolutions
,
resolveLevel1
Examples
data(pTableYeastRokas)
out=TINNIK(pTableYeastRokas,test="T3",alpha=.01, beta=.05)
labelIntNodes(out$ToB)
[Package MSCquartets version 3.2 Index]