vermeulen-package {vermeulen}R Documentation

vermeulen: Biomarker Data Set by Vermeulen et al. (2009)

Description

The biomarker data set by Vermeulen et al. (2009) doi:10.1016/S1470-2045(09)70154-8 is provided. The data source, however, is by Ruijter et al. (2013) doi:10.1016/j.ymeth.2012.08.011. The original data set may be downloaded from https://medischebiologie.nl/wp-content/uploads/2019/02/qpcrdatamethods.zip. This data set is for a real-time quantitative polymerase chain reaction (PCR) experiment that comprises the raw fluorescence data of 24,576 amplification curves. This data set comprises 59 genes of interest and 5 reference genes. Each gene was assessed on 366 neuroblastoma complementary DNA (cDNA) samples and on 18 standard dilution series samples (10-fold 5-point dilution series x 3 replicates + no template controls (NTC) x 3 replicates).

Author(s)

Maintainer: Ramiro Magno rmagno@pattern.institute (ORCID)

Other contributors:

See Also

Useful links:


[Package vermeulen version 0.1.2 Index]