predatorFAs {QFASA} | R Documentation |
Predator fatty acid signatures. Each predator signature is a row
with fatty acid proportions in columns.
Description
Fatty acid signatures are subsetted for the chosen fatty acid set
and renormalized during the modelling so there is no need to subset
and/or renormalize prior to running p.QFASA. However, make sure that
the the same fatty acids appear in the predator and prey files (if a
FA appears in one but not the other the code will give you an
error).
Usage
predatorFAs
Format
A data frame with 10 observations and 70 variables:
- SampleCode
TODO
- AnimalCode
TODO
- SampleGroup
TODO
- Biopsy
TODO
- c12.0
- c13.0
- Iso14
- c14.0
- c14.1w9
- c14.1w7
- c14.1w5
- Iso15
- Anti15
- c15.0
- c15.1w8
- c15.1w6
- Iso16
- c16.0
- c16.1w11
- c16.1w9
- c16.1w7
- c7Mec16.0
- c16.1w5
- c16.2w6
- Iso17
- c16.2w4
- c16.3w6
- c17.0
- c16.3w4
- c17.1
- c16.4w3
- c16.4w1
- c18.0
- c18.1w13
- c18.1w11
- c18.1w9
- c18.1w7
- c18.1w5
- c18.2d5.11
- c18.2w7
- c18.2w6
- c18.2w4
- c18.3w6
- c18.3w4
- c18.3w3
- c18.3w1
- c18.4w3
- c18.4w1
- c20.0
- c20.1w11
- c20.1w9
- c20.1w7
- c20.2w9
- c20.2w6
- c20.3w6
- c20.4w6
- c20.3w3
- c20.4w3
- c20.5w3
- c22.1w11
- c22.1w9
- c22.1w7
- c22.2w6
- c21.5w3
- c22.4w6
- c22.5w6
- c22.4w3
- c22.5w3
- c22.6w3
- c24.1w9
Details
Unlike the original QFASApack code the predator data can
contain as much tombstone data in columns as you wish but the
predator FA signatures must be extracted as a separate input in
order to run in p.QFASA.
[Package
QFASA version 1.0.3
Index]