exclMarkers {statgenQTLxT} | R Documentation |
Select markers to be excluded from GWAS scan.
Description
Helper function for selecting markers to be excluded from GWAS scan. Markers are excluded if they are identical to any of the snpCovariates (including the snpCovariates themselves).
Usage
exclMarkers(snpCov, markers, allFreq, ref = NULL)
Arguments
snpCov |
A character vector of snpCovariates. |
markers |
A matrix with marker information. |
allFreq |
A numerical vector of allele frequencies of the markers in
|
Value
A numerical vector of markers to be exluded from the GWAS scan.
[Package statgenQTLxT version 1.0.3 Index]