%global __brp_check_rpaths %{nil} %global __requires_exclude ^libmpi %global packname MDCcure %global packver 0.1.0 %global rlibdir /usr/local/lib/R/library Name: R-CRAN-%{packname} Version: 0.1.0 Release: 1%{?dist}%{?buildtag} Summary: Martingale Dependence Tools and Testing for Mixture Cure Models License: GPL-3 URL: https://cran.r-project.org/package=%{packname} Source0: %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz BuildRequires: R-devel Requires: R-core BuildRequires: R-CRAN-Rcpp BuildRequires: R-CRAN-RcppParallel BuildRequires: R-CRAN-ggplot2 BuildRequires: R-CRAN-ggtext BuildRequires: R-CRAN-gridExtra BuildRequires: R-CRAN-future BuildRequires: R-CRAN-future.apply BuildRequires: R-CRAN-smcure BuildRequires: R-CRAN-npcure BuildRequires: R-CRAN-survival BuildRequires: R-CRAN-RcppArmadillo Requires: R-CRAN-Rcpp Requires: R-CRAN-RcppParallel Requires: R-CRAN-ggplot2 Requires: R-CRAN-ggtext Requires: R-CRAN-gridExtra Requires: R-CRAN-future Requires: R-CRAN-future.apply Requires: R-CRAN-smcure Requires: R-CRAN-npcure Requires: R-CRAN-survival %description Computes martingale difference correlation (MDC), martingale difference divergence, and their partial extensions to assess conditional mean dependence. The methods are based on Shao and Zhang (2014) . Additionally, introduces a novel hypothesis test for evaluating covariate effects on the cure rate in mixture cure models, using MDC-based statistics. The methodology is described in Monroy-Castillo et al. (2025, manuscript submitted). %prep %setup -q -c -n %{packname} # fix end of executable files find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \; # prevent binary stripping [ -d %{packname}/src ] && find %{packname}/src -type f -exec \ sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true [ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \ sed -i 's@-g0@@g' {} \; || true # don't allow local prefix in executable scripts find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \; %build %install mkdir -p %{buildroot}%{rlibdir} %{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname} test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so) rm -f %{buildroot}%{rlibdir}/R.css # remove buildroot from installed files find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \; %files %{rlibdir}/%{packname}