bmiq_norm_450k {rplec} | R Documentation |
Normalize DNA methylation values
Description
This function normalize DNA methylation values from 450k probes. The probes are filtered and ordered the same way to the input when we developed our placental epigenetic clock.
Usage
bmiq_norm_450k(beta, cores = 1, verbose = FALSE)
Arguments
beta |
A data frame of beta values where each column represents a
sample and each row represent a probe. The rows must be named according to
the probe IDs. They include all the required probes. Run
|
cores |
An integer indicating the number of threads. |
verbose |
A logical scalar indicating whether to show a progress bar. |
Value
A data frame of normalized beta values.
Examples
beta_values_case <- download_beta_values_case()
norm_beta_values_case <- bmiq_norm_450k(beta_values_case)
[Package rplec version 0.1.3 Index]