pdac {ShrinkageTrees}R Documentation

Processed TCGA PAAD dataset (pdac)

Description

A reduced and cleaned subset of the TCGA pancreatic ductal adenocarcinoma (PAAD) dataset, derived from The Cancer Genome Atlas (TCGA) PAAD cohort. This version, pdac, is smaller and simplified for practical analyses and package examples.

Usage

pdac

Format

A data frame with rows corresponding to patients and columns as described above.

Details

This dataset was originally compiled and curated in the open-source pdacR package by Torre-Healy et al. (2023), which harmonized and integrated the TCGA PAAD gene expression and clinical data. The current version further reduces and simplifies the data for efficient modeling demonstrations and survival analyses.

The data frame includes:

Source

doi:10.1016/j.ccell.2017.07.007

References


[Package ShrinkageTrees version 1.0.0 Index]