LD {HaploVar}R Documentation

Linkage Disequilibrium Matrix

Description

Pairwise R^2 values for 490 Brassica napus single nucleotide polymorphisms (SNPs).

Usage

LD

Format

An object of class data.frame with 490 rows and 490 columns.

Source

Wu, D., Liang, Z., Yan, T., Xu, Y., Xuan, L., Tang, J., Zhou, G., Lohwasser, U., Hua, S., Wang, H., Chen, X., Wang, Q., Zhu, L., Maodzeka, A., Hussain, N., Li, Z., Li, X., Shamsi, I. H., Jilani, G., … Jiang, L. (2019). Whole-Genome Resequencing of a Worldwide Collection of Rapeseed Accessions Reveals the Genetic Basis of Ecotype Divergence. Molecular Plant, 12(1), 30–43. https://doi.org/10.1016/j.molp.2018.11.007


[Package HaploVar version 0.1.1 Index]