bage-package {bage} | R Documentation |
Package 'bage'
Description
Bayesian estimation and forecasting of age-specific rates. Estimation uses TMB, and is fast.
Example workflow
Specify model using
mod_pois()
Fit model using
fit()
Extract results using
augment()
Check model using
replicate_data()
Functions
Specify model
-
mod_pois()
Specify a Poisson model -
mod_binom()
Specify a binomial model -
mod_norm()
Specify a normal model -
set_prior()
Specify prior for main effect or interaction -
priors List of available priors for main effects or interactions
-
set_disp()
Specify prior for dispersion/variance -
set_var_age()
Identify age variable in data -
set_var_sexgender()
Identify sex or gender variable in data -
set_var_time()
Identify time variable in data
Fit model
-
fit()
Derive posterior distribution -
is_fitted()
See if model has been fitted
Extract results
-
augment()
Add cell-level estimates to data -
components() Hyper-parameters
-
tidy()
One-line summary -
set_n_draw()
Specify number of prior or posterior draws
Forecast
-
forecast()
Use model to obtain estimates for future periods
Check model
-
replicate_data()
Compare real and simulated data -
report_sim()
Simulation study of model
SVD-based modelling of age profiles
-
components() Matrices and offsets from scaled SVD
-
generate() Random profiles
-
HFD Scaled SVD of fertility rates from Human Fertility Database
-
HMD Scaled SVD of mortality rates from Human Mortality Database
-
LFP Scaled SVD of labor force participation rates from OECD
Data
-
isl_deaths Deaths in Iceland
-
kor_births Births in South Korea
-
nld_expenditure Health expenditure in the Netherlands
-
nzl_divorces Divorces in New Zealand
-
nzl_households One-person households in New Zealand
-
nzl_injuries Fatal injuries in New Zealand
-
swe_infant Infant mortality in Sweden
-
usa_deaths Accidental deaths in the USA
Author(s)
Maintainer: John Bryant john@bayesiandemography.com
Authors:
Junni Zhang junnizhang@163.com
Other contributors:
Bayesian Demography Limited [copyright holder]
See Also
Useful links:
Report bugs at https://github.com/bayesiandemography/bage/issues