HLA_column_repair {immunogenetr} | R Documentation |
HLA_column_repair
Description
This function will change column names that have the official HLA nomenclature (e.g. "HLA-A*" or "HLA-A") to a format more easily selected in tidyverse functions (e.g. "HLA_A"). The dash and asterisk are special characters in R, and makes selecting columns by name difficult. This function will also allow for easily changing back to WHO-compliant nomenclature (e.g. "HLA-A*").
Usage
HLA_column_repair(data, format = "tidyverse", asterisk = FALSE)
Arguments
data |
A data frame |
format |
Either "tidyverse" or "WHO". |
asterisk |
Logical value to return column with an asterisk. |
Value
A data frame object with column names renamed in the specified format.
Examples
HLA_type <- data.frame(
"HLA-A*" = c("01:01", "02:01"),
"HLA-B*" = c("07:02", "08:01"),
"HLA-C*" = c("03:04", "04:01"),
stringsAsFactors = FALSE
)
HLA_column_repair(HLA_type, format = "tidyverse")
[Package immunogenetr version 0.3.1 Index]