count_test {dpcR} | R Documentation |
Class "count_test"
Description
Objects of this class are created by test_counts
.
Usage
## S4 method for signature 'count_test'
summary(object)
## S4 method for signature 'count_test'
coef(object)
## S4 method for signature 'count_test'
show(object)
## S4 method for signature 'count_test,ANY'
plot(x, aggregate = FALSE, nice = TRUE)
Arguments
object |
of class |
x |
object of class |
aggregate |
logical, if |
nice |
logical, if |
Details
In case of the aggregated plot, mean confidence intervals for groups are presented as dashed lines.
Methods (by generic)
-
summary
: Summary statistics of assigned groups. -
coef
: Extract coefficients of groups. -
show
: Print bothgroup_coef
andtest_res
. -
plot
: plots mean number of molecules per partition and its confidence intervals.
Slots
- group_coef
"data.frame"
containing experiments, groups to which they belong and calculated values of rate (lambda).- test_res
"matrix"
containing result of multiple comparisions t-test.- model
"character"
name of GLM used to compare experiments.
Author(s)
Michal Burdukiewicz.