generate_levey_jennings_report {SerolyzeR} | R Documentation |
Generate a Levey-Jennings Report for Multiple Plates.
Description
This function generates a Levey-Jennings report for a list of plates. The report includes layout plot, levey jennings plot, for each analyte and selected dilutions.
The report also includes stacked standard curves plot in both monochromatic and color versions for each analyte.
The report is generated using the levey_jennings_report_template.Rmd
template.
Usage
generate_levey_jennings_report(
list_of_plates,
report_title,
dilutions = c("1/100", "1/400"),
filename = NULL,
output_dir = "reports",
additional_notes = NULL
)
Arguments
list_of_plates |
A list of plate objects. |
report_title |
( |
dilutions |
( |
filename |
( |
output_dir |
( |
additional_notes |
( |
Value
A Levey-Jennings report in HTML format.
Examples
output_dir <- tempdir(check = TRUE)
dir_with_luminex_files <- system.file("extdata", "multiplate_lite",
package = "SerolyzeR", mustWork = TRUE
)
list_of_plates <- process_dir(dir_with_luminex_files,
return_plates = TRUE, format = "xPONENT", output_dir = output_dir
)
note <- "This is a Levey-Jennings report.\n**Author**: Jane Doe \n**Tester**: John Doe"
generate_levey_jennings_report(
list_of_plates = list_of_plates,
report_title = "QC Report",
dilutions = c("1/100", "1/200"),
output_dir = tempdir(),
additional_notes = note
)