benefit |
Calculate taxon conservation benefit |
clade_dist |
Pairwise distances among clades or nodes |
moss |
Load California moss spatial phylogenetic data |
phylospatial |
Create a spatial phylogenetic object |
plot.phylospatial |
Plot a 'phylospatial' object |
plot_lambda |
Plot alternative lambda values |
ps_add_dissim |
Add community dissimilarity data to a 'phylospatial' object |
ps_canape |
Categorical Analysis of Neo- and Paleo-Endemism (CANAPE) |
ps_canaper |
Binary randomization tests including CANAPE |
ps_dissim |
Quantitative phylogenetic dissimilarity |
ps_diversity |
Calculate spatial phylogenetic diversity and endemism metrics |
ps_get_comm |
Get 'phylospatial' community data |
ps_ordinate |
Community phylogenetic ordination |
ps_prioritize |
Phylogenetic conservation prioritization |
ps_rand |
Null model randomization analysis of alpha diversity metrics |
ps_regions |
Cluster analysis to identify phylogenetic regions |
ps_regions_eval |
Evaluate region numbers |
ps_rgb |
Map phylospatial data onto RGB color bands |
ps_simulate |
Simulate a toy spatial phylogenetic data set |
quantize |
Stratified randomization of community matrix |
to_spatial |
Convert a site-by-variable matrix into a SpatRaster or sf object |