agf {orthGS} | R Documentation |
Angiosperms Gymnosperms Ferns
Description
Angiosperms Gymnosperms Ferns
Usage
agf
Format
A dataframe with 275 rows (GS proteins) and 23 columns:
- n
Reference number
- phylo_id
Unique identification label of the protein/gen
- species
Species
- taxon
Acrogymnospermae, Angiospermae, Polypodiopsida
- dna
CDS sequence
- prot
Protein sequence
- short
Unique three letter identification of the species
- gs
GS2, GS1a or GS1b_Ang, GS1b_Gym
- pI
isoelectric point
- factor
Ferns, GS2, GS1a, GS1b_Ang, GS1b_Gym
- size
number of residues
- CSpos
position signal
- prediction
prediction
- Lk_SP
seq pep
- Lk_mTP
mit
- Lk_cTP
chl
- Lk_Thylak
thy
- secAa
amino acid at position 2
- core
core
- dabase
db
- acc
acc
- up_id
uniprot
- note
note
Source
It has been manually curated by the authors
[Package orthGS version 0.1.8 Index]