addParents {nprcgenekeepr} | R Documentation |
Add parents
Description
Pedigree curation function Given a pedigree, find any IDs listed in the "sire" or "dam" columns that lack their own line entry and generate one.
Usage
addParents(ped)
Arguments
ped |
datatable that is the |
Details
This must be run after to addUIds
since the IDs made there are
used by addParents
Value
An updated pedigree with entries added as necessary.
Entries have the id and sex specified; all remaining columns are filled
with NA
.
Examples
pedTwo <- data.frame(
id = c("d1", "s2", "d2", "o1", "o2", "o3", "o4"),
sire = c(NA, NA, NA, "s1", "s1", "s2", "s2"),
dam = c(NA, NA, NA, "d1", "d2", "d2", "d2"),
sex = c("F", "M", "F", "F", "F", "F", "M"),
stringsAsFactors = FALSE
)
newPed <- addParents(pedTwo)
newPed
[Package nprcgenekeepr version 1.0.7 Index]