Assay5T-class {SeuratObject} | R Documentation |
The Transposed v5 Assay
Object
Description
The Transposed v5 Assay
Object
Slots
layers
A named list containing expression matrices; each matrix should be a two-dimensional object containing some subset of cells and features defined in the
cells
andfeatures
slots. Cell and feature membership is recorded in thecells
andfeatures
slots, respectivelycells
A logical mapping of cell names and layer membership; this map contains all the possible cells that this assay can contain. New layers must have some subset of cells present in this map
features
A logical mapping of feature names and layer membership; this map contains all the possible features that this assay can contain. New layers must have some subset of features present in this map
default
A one-length integer with the end index of the default layer; the default layer be all layers up to and including the layer at index
default
assay.orig
Original assay that this assay is based off of; used to track assay provenance
meta.data
A data frame with feature-level meta data; should have the same number of rows as
features
misc
A named list of unstructured miscellaneous data
key
A one-length character vector with the object's key; keys must be one or more alphanumeric characters followed by an underscore “
_
” (regex pattern “^[a-zA-Z][a-zA-Z0-9]*_$
”)
Lifecycle
Warning: functionality described here is experimental and prone to change without notice