weight_rollmean {SlideCNA}R Documentation

Expressional smoothing along a chromosome using a weighted pyramidal moving average

Description

Take in a data.table of genomic positions and bead normalized/modified counts and apply pyramidal weighting with a window size k to create smoothed expression intensities

Usage

weight_rollmean(dat, k = 101)

Arguments

dat

data.table of normalized/adjusted counts

k

size of window for weighting

Value

A data.table of expression intensities


[Package SlideCNA version 0.1.0 Index]