do_metabowas {MiMIR} | R Documentation |
Helper function to compute MetaboWASs
Description
This helper function is called when doing Metabolites wide association analysis. It reports the results of linear regression models to study the association of a test variable to each metabolites individually and corrected for the covariates indicated.
Usage
do_metabowas(
phen,
dat,
test_variable = "age",
covariates = c("sex"),
adj_method = "BH",
quiet = TRUE
)
Arguments
phen |
phenotypes data.frame |
dat |
metabolites data.frame |
test_variable |
the variable to be investigated |
covariates |
the covariates that you want to add |
adj_method |
correction method. |
quiet |
if FALSE it will plot the amount of people avaialble |
Value
results= the results of the MetaboWAS (estimate, tstatistics, pvalue, BH corrected pvalue)
[Package MiMIR version 1.5 Index]