spatialTIME_summary_functions {mxfda}R Documentation

spatialTIME summary function extraction

Description

spatialTIME summary function extraction

Usage

spatialTIME_summary_functions(
  mxFDAobject,
  metric = "uni k",
  markers = NULL,
  r_range = 0:100,
  num_permutations = 50,
  edge_correction = "trans",
  permute = TRUE,
  workers = 1,
  xloc = "x",
  yloc = "y"
)

Arguments

mxFDAobject

object of class mxFDA for which to calculate summary functions

metric

string vector with combination of uni/bi k/g

markers

column names of spatial

r_range

vector of radii to calculate metrics

num_permutations

integer for the number of permutations to perform

edge_correction

character vector of length 1 or 2 depending on the metrics for edge corrections to perform

permute

logical whether to permute CSR or not. Required TRUE for Nearest Neighbor G

workers

integer for number of cores to use to calculate derived variables

xloc, yloc

columns in the spatial data which to use for point locations

Details

[Experimental]

Value

mxFDA object with the summary function slots filled according to input metric

Author(s)

Alex Soupir alex.soupir@moffitt.org

Examples

# example code


[Package mxfda version 0.2.2-1 Index]