score.cells.nb1 {pagoda2} | R Documentation |
Score cells after standardising the expression of each gene removing outliers
Description
Score cells after standardising the expression of each gene removing outliers
Usage
score.cells.nb1(data, signature, quantile.cutoff = 0.01)
Arguments
data |
matrix of expression, rows are cell, columns are genes |
signature |
a character vector of genes to use in the signature |
quantile.cutoff |
numeric The quantile extremes to trim before plotting (default=0.0.1) |
Value
The filtered subset of gene signatures
[Package pagoda2 version 1.0.12 Index]