extract_subnetwork {SiFINeT} | R Documentation |
extract_subnetwork
Description
The function extract a subnetwork from the co-expression network
Usage
extract_subnetwork(
so,
target_gene_name = NULL,
target_gene_id = NULL,
positive = TRUE
)
Arguments
so |
a SiFINeT object |
target_gene_name |
the names of the target genes in the output network |
target_gene_id |
the indices of the target genes in the output network, not used when target_gene_name is not Null |
positive |
whether only positive (default) co-expressions or all co-expressions are considered in assigning edges |
Value
an adjacency matrix of the output subnetwork
[Package SiFINeT version 1.13 Index]