ensembl_ieg_list {scCustomize} | R Documentation |
Immediate Early Gene (IEG) gene lists
Description
Ensembl IDs for immediate early genes (Ensembl version 112; 4/29/2024)
Usage
ensembl_ieg_list
Format
A list of seven vectors
- Mus_musculus_IEGs
Ensembl IDs for IEGs from source publication (see below)
- Homo_sapiens_IEGs
Ensembl IDs for homologous genes from mouse gene list
Source
Mouse gene list is from: SI Table 4 from doi:10.1016/j.neuron.2017.09.026. Human gene list was compiled by first creating homologous gene list using biomaRt and then adding some manually curated homologs according to HGNC. See data-raw directory for scripts used to create gene list.
[Package scCustomize version 3.0.1 Index]