A Model Library for 'nlmixr2'


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Documentation for package ‘nlmixr2lib’ version 0.3.0

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addBaseline1exp Add baseline that decays exponential with time
addBaselineConst Add an estimated baseline constant
addBaselineExp Add baseline that decays exponential with time
addBaselineLin Add an estimated baseline linear constant
addBioavailability Add a property to a compartment
addCmtProp Add a property to a compartment
addDepot To convert from infusion/intravenous administration to first-order oral absorption
addDirectLin Add direct linear effect with baseline=0
addDirToModelDb Add a directory to the modeldb
addDur Add a property to a compartment
addEffectCmtLin Add effect compartment
addEta Add random effects to a model
addFileToModelDb Add a directory to the modeldb
addIndirect Add an indirect response model to a PK model
addIndirectLin Add linear indirect response model
addIni Add a property to a compartment
addLag Add a property to a compartment
addLogEstimates Add log estimates to a model
addRate Add a property to a compartment
addResErr Add residual error to a model
addTransit To add transit compartments to the model
addWeibullAbs Converts first order absorption model to Weibull absorption model
blankCombine Default combine strings
camelCombine Default combine strings
combinePaste2 Combine two strings using a naming convention
convertEmax Convert linear effect to Emax effect
convertEmaxHill Convert linear effect to Emax-Hill effect
convertKinR0 Convert a kin/kout indirect response model to R0 and kout
convertLogLin Converts a linear effect to a log-linear effect
convertMM Convert models from linear elimination to Michaelis-Menten elimination
convertQuad Convert linear elimination to quadratic elimination
defaultCombine Default combine strings
dotCombine Default combine strings
fakeCc Fake blank Cc for creating PD only models
modeldb Model library for nlmixr2
modellib Get the model from the model library
pkTrans Change the transformation type for PK models
readModelDb Read a model from the nlmixr2 model database
removeDepot To convert from first order oral absorption to IV/Intravenous
removeLinesAndInis Removes lines and inis from a model
removeTransit To remove transit compartments from the model
searchReplace Search within a model to replace part of the model
searchReplaceHelper Search within a model to replace part of the model
setCombineType Change the default combine type for the package
snakeCombine Default combine strings
updateOncologyXenograftSimeoni2004 Update an oncology xenograft model based on Simeoni 2004