%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  vigicaen
%global packver   0.15.6
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          0.15.6
Release:          1%{?dist}%{?buildtag}
Summary:          'VigiBase' Pharmacovigilance Database Toolbox

License:          CeCILL-2.1
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 4.1.0
Requires:         R-core >= 4.1.0
BuildArch:        noarch
BuildRequires:    R-CRAN-arrow 
BuildRequires:    R-CRAN-cli 
BuildRequires:    R-CRAN-dplyr 
BuildRequires:    R-CRAN-data.table 
BuildRequires:    R-CRAN-fst 
BuildRequires:    R-CRAN-ggplot2 
BuildRequires:    R-CRAN-glue 
BuildRequires:    R-CRAN-gridExtra 
BuildRequires:    R-CRAN-lifecycle 
BuildRequires:    R-CRAN-purrr 
BuildRequires:    R-CRAN-rlang 
BuildRequires:    R-CRAN-stringr 
BuildRequires:    R-CRAN-tidyr 
Requires:         R-CRAN-arrow 
Requires:         R-CRAN-cli 
Requires:         R-CRAN-dplyr 
Requires:         R-CRAN-data.table 
Requires:         R-CRAN-fst 
Requires:         R-CRAN-ggplot2 
Requires:         R-CRAN-glue 
Requires:         R-CRAN-gridExtra 
Requires:         R-CRAN-lifecycle 
Requires:         R-CRAN-purrr 
Requires:         R-CRAN-rlang 
Requires:         R-CRAN-stringr 
Requires:         R-CRAN-tidyr 

%description
Perform the analysis of the World Health Organization (WHO)
Pharmacovigilance database 'VigiBase' (Extract Case Level version),
<https://who-umc.org/> e.g., load data, perform data management,
disproportionality analysis, and descriptive statistics. Intended for
pharmacovigilance routine use or studies. This package is NOT supported
nor reflect the opinion of the WHO, or the Uppsala Monitoring Centre.
Disproportionality methods are described by Norén et al (2013)
<doi:10.1177/0962280211403604>.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}