obtain_coordinates_for_segments_multiple {shinyWGD}R Documentation

Obtain Coordinates for Segments in Multiple Synteny Blocks

Description

This function extracts coordinates for segments within multiple synteny blocks based on input dataframes.

Usage

obtain_coordinates_for_segments_multiple(seg_df, gff_df, input, out_file)

Arguments

seg_df

A dataframe containing information about synteny segments.

gff_df

A dataframe containing GFF (General Feature Format) information.

input

A list containing input data, typically multiple synteny query chromosomes.

out_file

A character string specifying the output file path.

Value

A dataframe with coordinates for segments within multiple synteny blocks.


[Package shinyWGD version 1.0.0 Index]