cluster_synteny {shinyWGD} | R Documentation |
Cluster Synteny Data and Generate Trees
Description
This function clusters synteny data based on calculated p-values and generates trees for both column-based and row-based clustering. It then saves the cluster information and trees to output files.
Usage
cluster_synteny(
segmented_file,
segmented_anchorpoints_file,
genes_file,
out_file
)
Arguments
segmented_file |
A character string specifying the file path for segmented data. |
segmented_anchorpoints_file |
A character string specifying the file path for segmented anchorpoints. |
genes_file |
A character string specifying the file path for genes information created by i-ADHoRe. |
out_file |
A character string specifying the output file path for saving cluster information. |
Value
NULL (output files are generated with the specified information).
[Package shinyWGD version 1.0.0 Index]