Visualize, Summarize and Simulate Data from Pedigrees


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Documentation for package ‘pedtricks’ version 0.4.2

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convert_ped Converts a pedigree with individuals specified as factors to a numeric pedigree
draw_ped Produce a graphical representation of a pedigree
draw_pedA Produce a graphical representation of the relatedness matrix of a pedigree
fix_ped Manipulating pedigrees to prepare them for requirements of subsequent analyses Prepares a pedigree to conform with requirements of many softwares used in quantitative genetic analysis, as well as for many of the functions in pedtricks.
genome_sim A function to simulate QTL and/or SNP data.
ggpedigree ggpedigree: Plotting tool for simple and complex pedigrees.
gryphons Example dataset for pedtricks examples and tutorial
micro_sim Simulates microsatellite data across a pedigree.
pedigreeStats Calculates a range of statistics of pedigrees
ped_stats Calculates a range of statistics of pedigrees
phen_sim A function to simulated phenotypic data
plot.ped_stats Plot output from ped_stats
summary.ped_stats Post-processes output from ped_stats
WarblerG Seychelles Warbler Genotypes