BulkReadMARS {QuICSeedR} | R Documentation |
Bulk Read MARS data
Description
Bulk Read MARS data
Usage
BulkReadMARS(path, plate_subfix, raw_subfix, helper_func = NULL)
Arguments
path |
Character string specifying the path to the parent directory containing the data folders. |
plate_subfix |
Character string used to identify plate data files. |
raw_subfix |
Character string used to identify raw data files. |
helper_func |
Optional function to be applied to each column of the plate data (default: NULL). |
Details
The example dataset, located in inst/extdata/
, consists of folders representing
individual experimental runs. This dataset is a subset of the data used in a
publication led by Dr. Stuart Lichtenberg. For detailed information about the experiments, please
contact Dr. Stuart Lichtenberg at licht213@umn.edu
.
Each folder contains two Excel files:
A file with the suffix
plate
: Contains the plate setup and experimental information.A file with the suffix
raw
: Contains fluorescence data exported from MARS software.
Value
A list containing data from each folder, including plate, raw, and replicate data.
Examples
path = system.file("extdata", package = "QuICSeedR")
data <- BulkReadMARS(path = path,
plate_subfix = 'plate',
raw_subfix = 'raw')
str(data)