per_locus_means_and_vars {rubias} | R Documentation |
Compute the mean and variance of the single-locus genotype likelihoods for each collection
Description
This assumes that you have compiled params for a reference data set and then it just calls rcpp_per_locus and then summarizes the results.
Usage
per_locus_means_and_vars(par_list)
Arguments
par_list |
genetic data converted to the param_list format by |
Value
Returns a list with two components, mean and var, each one a matrix that has C (number of collections) rows and L (number of loci) columns, giving the mean (or variance) of the genotype likelihoods in the individuals in that collection at that locus.
[Package rubias version 0.3.4 Index]