computeMetrics_size2 {emcAdr} | R Documentation |
Function used in the reference article to compare diverse Disproportionality Analysis metrics
Description
Function used in the reference article to compare diverse Disproportionality Analysis metrics
Usage
computeMetrics_size2(CocktailList, ATCtree, observations, num_thread = 1L)
Arguments
CocktailList |
: A list of cocktails on which the Disproportionality analysis metrics should be computed |
ATCtree |
: ATC tree with upper bound of the DFS (without the root) |
observations |
: observation of the AE based on the medications of each patients (a DataFrame containing the medication on the first column and the ADR (boolean) on the second) on which we want to compute the risk distribution |
num_thread |
: Number of thread to run in parallel if openMP is available, 1 by default |
Value
Multiple DA metrics computed on CocktailList cocktails
Examples
data("ATC_Tree_UpperBound_2024")
data("FAERS_myopathy")
cocktails = list(c(561, 904),
c(1902, 4585)) # only size 2 cocktails allowed for this function
scores_of_cocktails = computeMetrics_size2(CocktailList = cocktails,
ATCtree = ATC_Tree_UpperBound_2024,
observations = FAERS_myopathy[1:100,])
[Package emcAdr version 1.2 Index]