getPredictions {ecotrends} | R Documentation |
Get predictions
Description
Get predictions
Usage
getPredictions(
rasts,
mods,
region = NULL,
type = "cloglog",
clamp = TRUE,
file = NULL,
verbosity = 2
)
Arguments
rasts |
(multi-layer) SpatRaster containing the variables (with the same names) used in the models. |
mods |
output of |
region |
optional SpatExtent or SpatVector polygon delimiting the region of 'rasts' within which to compute the predictions. The default is NULL, to use the entire extent of 'rasts'. Note that predictions may be unreliable outside the 'region' used for |
type |
character value to pass to |
clamp |
logical value to pass to |
file |
optional folder name (including path within the working directory) if you want the prediction rasters to be saved to disk. If 'file' already exists in the working directory (meaning that predictions were already computed), predictions are imported from there. |
verbosity |
integer value indicating the amount of messages to display. The default is 2, for the maximum number of messages available. |
Value
This function returns a SpatRasterDataset with one sub-dataset per period, each of which is a (multilayer) SpatRaster with the predictions of each replicate (if there are replicates) for that period.
Author(s)
A. Marcia Barbosa
References
Phillips, S.J., Anderson, R.P., Dudik, M., Schapire, R.E., Blair, M.E., 2017. Opening the black box: an open-source release of Maxent. Ecography 40, 887-893. https://doi.org/10.1111/ecog.03049
Examples
# Several data prep steps required.
# See https://github.com/AMBarbosa/ecotrends for a full worked example.