strg2sync {poolHelper} | R Documentation |
Create sync string for a single SNP
Description
Creates a string with the information for a single SNP. The information is coded as A-count:T-count:C-count:G-count:N-count:deletion-count. Note that we assume that the reference allele is always A and the alternative is always T.
Usage
strg2sync(reference, alternative)
Arguments
reference |
an integer representing the number of reads with the reference allele. |
alternative |
an integer representing the number of reads with the alternative allele. |
Value
a character string coded as A-count:T-count:C-count:G-count:N-count:deletion-count.
[Package poolHelper version 1.1.0 Index]