name_and_count_bigsnp {plmmr}R Documentation

A helper function to label and summarize the contents of a bigSNP

Description

A helper function to label and summarize the contents of a bigSNP

Usage

name_and_count_bigsnp(obj, id_var, quiet, outfile)

Arguments

obj

a bigSNP object, possibly subset by add_external_phenotype()

id_var

String specifying which column of the PLINK .fam file has the unique sample identifiers. Options are "IID" (default) and "FID".

quiet

Logical: should messages be printed to the console? Defaults to TRUE

outfile

The string with the name of the .log file

Value

a list with components:


[Package plmmr version 4.2.1 Index]