print.change.points {seq2R} | R Documentation |
Short find.points summary
Description
find.points
summary.
Usage
## S3 method for class 'change.points'
print(x=model,...)
Arguments
x |
|
... |
Other options. |
Value
The function computes and returns a list of short information for a fitted change.points
object.
Number of A-T base pairs |
The returned value is the total nucleotide (adenine and thymine) contained in the sequence analyzed. |
Number of C-G base pairs |
In this case, the returned value is the sum of cytosine and guanine contained at the sequence. |
Number of binning nodes |
The number of binning nodes over which the function is to be estimated. |
Number of bootstrap repeats |
Number of bootstrap repeats. |
Bandwidth |
Value of the Kernel bandwidth or smoothing parameter used in the fiiting for A vs. T and C vs. G. |
Exists any critical point |
Emphasize if there is or not any critical. |
Note
See details in find.points
.
Author(s)
Nora M. Villanueva and Marta Sestelo.
Examples
library(seq2R)
#mtDNAhum <- read.genbank("NC_012920")
data(mtDNAhum)
DNA <- transform(mtDNAhum)
seq1 <- find.points(DNA)
seq1
[Package seq2R version 2.0.1 Index]