rba_uniprot_proteomics {rbioapi} | R Documentation |
Get Proteomics Peptides Mapped to UniProt Protein (Deprecated)
Description
This function is Deprecated. Please use
rba_uniprot_proteomics_non_ptm
instead.
UniProt maps proteomics peptides from different sources to the proteins'
sequences. Using this function, you can retrieve all the proteomics
peptides features that has been map to a given UniProt protein's sequence.
Usage
rba_uniprot_proteomics(accession, ...)
Arguments
accession |
|
... |
rbioapi option(s). See |
Value
A list containing the proteomics peptides features of your supplied UniProt protein's sequence.
Corresponding API Resources
"GET https://www.ebi.ac.uk/proteins/api/proteomics/{accession}"
References
The UniProt Consortium, UniProt: the universal protein knowledgebase in 2021, Nucleic Acids Research, Volume 49, Issue D1, 8 January 2021, Pages D480–D489, https://doi.org/10.1093/nar/gkaa1100
Andrew Nightingale, Ricardo Antunes, Emanuele Alpi, Borisas Bursteinas, Leonardo Gonzales, Wudong Liu, Jie Luo, Guoying Qi, Edd Turner, Maria Martin, The Proteins API: accessing key integrated protein and genome information, Nucleic Acids Research, Volume 45, Issue W1, 3 July 2017, Pages W539–W544, https://doi.org/10.1093/nar/gkx237
See Also
Other "Deprecated functions":
rba_uniprot_proteomics_search()
,
rba_uniprot_ptm()
,
rba_uniprot_ptm_search()
Examples
## Not run:
#Deprecated
rba_uniprot_proteomics(accession = "P25942")
## End(Not run)