compute_variance_covariance.OU {PhylogeneticEM}R Documentation

Complete variance covariance matrix for OU

Description

compute_variance_covariance.OU computes the (n+m)*p squared variance covariance matrix of vec(X).

Usage

compute_variance_covariance.OU(times_shared, distances_phylo, params_old, ...)

Arguments

times_shared

times of shared ancestry of all nodes and tips, result of function compute_times_ca

params_old

(list) : old parameters to be used in the E step

Value

matrix of variance covariance for the OU


[Package PhylogeneticEM version 1.8.0 Index]