validHGNCSymbols {GoMiner} | R Documentation |
validHGNCSymbols
Description
convert outdated HGNC symbols to current HGNC symbols
Usage
validHGNCSymbols(geneList)
Arguments
geneList |
character vector of HGNC symbols |
Details
removes NA and /// from output of checkGeneSymbols()
Value
returns list of mapping table and vector of current HGNC symbols
Examples
geneList<-c("FN1", "tp53", "UNKNOWNGENE","7-Sep",
"9/7", "1-Mar", "Oct4", "4-Oct","OCT4-PG4", "C19ORF71",
"C19orf71")
l<-validHGNCSymbols(geneList)
[Package GoMiner version 1.0 Index]